Pgib022949.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- FASN
- Assembly
- GCA_963971405.1
- Location
- OZ020492.1:11909331-11922007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-10 1.1e-07 31.9 0.0 2 42 488 528 487 530 0.91
Sequence Information
- Coding Sequence
- ATGGTTCAACTTCTGGACATTGAGGAGTCTCAGCGCCGTTGCCTGGAAGCTGGCCGAGTACTAGCCAGCCCCTCTCCAGGCGAAGAAGTCGTCATCACCGGCTGTTCTGGACGCTTTCCCAACAGTGACAACGTCCACGAGCTTCGAGACAACCTTTTCAACAAAGTTGACTTGATTTCGGATGATGGAAGACGATGGAACTTACAGCACGATGAAATCCCACAAAGGACTGGAAAAATCAACCATGTCAGCAAATTTGACGCAGCCTTCTTTGGGATCCACTACAAACAGGCCCATGTTATGGACCCTCTCTGCAGGGTTCTTATGGAGCGAGCTTATGAAGCCATTGTCGATGCAGGTGTTAACCCAAGAAAGCTACGAGGAACCCGCTGTGGTGTCTTCATTGGCGCCTGTTTCAGCGAATCAGAAAAGACCTGGTTTTACGAACGAATGAATATCAATGGATTTGGTATCCTCGGAAGCTCCCGTGCCATGCTTTCAAACCGAATTTCCTACTGGCTCGGAACTAGTGgCCCTAGCTATACTGTTGACTCGGCCTGCTCGAGCTCTCTCTACGCCGTCGAGCATGCTTACAAAGCTATCCGTGACGGGATCTGCGACTCCGCCATTGTGGGTGGCTGCAATCTCTGCTTACATCCCTACGTATCCCTCCAGTTCTCCCGTCTGGGAGTACTTTCTCCTGACGGCCGATGCAAAGCTTTCGATCAATCTGCAAATGGGTACTGCCGTGCAGAAGCTGTTACAGTGCTTTTCCTCCAAAAGTCCAAAGATGCCAAGCGAGTATACGCAACTATTGTCCACGCTAAGACCAACTGTGATGGATACAAAGAGCAGGGTATTACCTATCCTAGTGGTCAAATGCAGAAAAAGCTCCTGGAAGATTTCTACCAAGAGTGCCTGGTTGATCCATCGAAACTTGCCTACATAGAAGCTCACGGCACCGGCACGAAGGTAGGAGATCCTGAGGAGTGCAATGCTTTGGATCAAGTGTTCTGCACTGGCCGTAACCGTCCTTTACTAATTGGCTCCGTGAAATCAAATCTTGGACACACAGAACCCGCATCTGGAATTTGCTCCATCGTTAAAGTCATCATCTCCATGGAAACCGGTAAAATTCCACCGAATCTCTGGTTTAATGAGCCCAAGGATGGTATCCCTGGCTTCATTGAAGGGCGCTTAAAGGTAGTGTCTGAAATAGAGGATTTCGAGGGAGGAATGGCCGGTGTGAACTCATTTGGGTTTGGCGGAGCCAACTGCCATGTCCTCATGAACTGGAatgaaaaggaaaaaaagaatAATGGAGCTCCAACTGACAACCTAGCCAGGCTAATCAACCTATCCGGTCGTACAGAGGAAGCAGTACGAGTCCTTATTAAAGATGTGATGCCGAACGTTTACTTGTCAAAACTTCCTAGCGAATCGAGGAGGGGTTTGTGGACCCAAGAGCAGTTAATGAATGCTATAGATGCTGTAAAAACCAAAGTGCTTGGAGTAAACGAAGCTGCCAAAACCTACGGGATTCCATCCACAACACTAAAaaatagactaaaaaataacaacacaaACAAGGGGAGTCTTGGGCCTGACTCCGAACTTGGCATTGAAGCGGAGCGAAAACTAGCTTCTCATATAAAGAAGCTTCAGAGACATGGGTTTGCCCCAGATTCAAAGTCTGTCAGGGAGATGGCCTTTAATTTGGCCAAAAAAATGGGCATCAGAACCAAATTTAACGAAAAGGAAGTTTAG
- Protein Sequence
- MVQLLDIEESQRRCLEAGRVLASPSPGEEVVITGCSGRFPNSDNVHELRDNLFNKVDLISDDGRRWNLQHDEIPQRTGKINHVSKFDAAFFGIHYKQAHVMDPLCRVLMERAYEAIVDAGVNPRKLRGTRCGVFIGACFSESEKTWFYERMNINGFGILGSSRAMLSNRISYWLGTSGPSYTVDSACSSSLYAVEHAYKAIRDGICDSAIVGGCNLCLHPYVSLQFSRLGVLSPDGRCKAFDQSANGYCRAEAVTVLFLQKSKDAKRVYATIVHAKTNCDGYKEQGITYPSGQMQKKLLEDFYQECLVDPSKLAYIEAHGTGTKVGDPEECNALDQVFCTGRNRPLLIGSVKSNLGHTEPASGICSIVKVIISMETGKIPPNLWFNEPKDGIPGFIEGRLKVVSEIEDFEGGMAGVNSFGFGGANCHVLMNWNEKEKKNNGAPTDNLARLINLSGRTEEAVRVLIKDVMPNVYLSKLPSESRRGLWTQEQLMNAIDAVKTKVLGVNEAAKTYGIPSTTLKNRLKNNNTNKGSLGPDSELGIEAERKLASHIKKLQRHGFAPDSKSVREMAFNLAKKMGIRTKFNEKEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -