Pgib005037.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Psococerastis gibbosa
Gene Symbol
-
Assembly
GCA_963971405.1
Location
OZ020485.1:20673634-20681433[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-11 3.4e-09 36.8 0.2 1 36 449 484 449 492 0.92

Sequence Information

Coding Sequence
ATGGTGTTGGAGGCCATATTGAGAGATGAATTGGAGAAATCGGTGATTATCAATGGCTTTCGCACCTGCGGACTGTACCCATTTTGTCCCGACAATGTAAACTATGACAAGTGCGTACTGGATACCCACCGCTCAACTCATTCCCTCGCTCATTCCACTAAAACTGACCCAAGGCACGAATATTTAGAAAATCTTCTGGGTTCGGAGATTGTTGCATCCTTCAATGAGGATGCAGAGAGAATGAAGGACTCCCCATACTTCAAACTGTGGCTGAAGAGTAAGGAAGCATGTTTCAAAGTGCCGAATCCCGAGAATATGCCTCGCCTAAACATGGAACAACCCCTGTCGACCGAAAACAGCTACGAATACGAACCTGTTGACATTCTTGGCGAAAACATTACCGAGGAACCCCTCTCAGCCGAAAACAGCAACGAACCTGTTGACAATCTTGGCGAAAACATTACCGAGGAACCCCTATCAGCCGAAAACAGCAACGAACCTGTTGACAATCTTGGTGAAAACATTACCGAGGAACCCCTCACAGCAAAAAACAGCTTGTCGAATCCTGAGAATATGCCTCGCCTAAACACGGAACAACCCCTGTCGACGGAAAACAGCTACGAACCTGTTGACAATCTTGGCGAAAACATTACCGAGGAACATCTCTCAGCCGATAACAGCTACGAACCTGTCGGAAAGACAGAGCAGTTGGCTAAAGTTCTGTCTCCGGAAACCGACGGAAAAGGCGTACCAAGCCCATTACCTGGTTTAATAACAAATAGACCTACTTGCAGGGCTGTTACCTCTGAGGGAGAAGCGCAACAAGTGTTGGAATGTGTACAGGGACCCTGCCAAAGCACTGATCCCAAAGACATAGATGCTTTCATAAGTAAAGATAAGAAAGTCAAATGCATGCTAGTTCAATTTTTGGATGACAAGCAAATGGAAATAGTAATGGGAAAAAGTACAAGTCATGAAATGTGGCAAGCGTTAATTGATATATATGAAGATAAAGGAATCAGCGCCCAGCTAGCTATACGAAAGAAAATAGCCGTGCTCAAGATGTCGGAAGGTGCAGATGTAGATGCCCATTGCACGAACTTGATGGAACTTGTTCGACAACTCAAGGAAACAGGCACGTCCATTTCAGACGACGAGATCATTTGCACACTATTATTAAGCTTACCTACATCGTTTGAAACGGTAGTCACACTCATCGAGAATTTGGATATAAAATCCCTGACCTACGAGACAGTTAGGAACAAACTACGCAGCTTTGGAAACTCTAAGAAAACCCCTGAAGAAAACCTTATTATTCCTGCTACAAGAAAACGTGGGACTTGGACCAATGCAAACTTGCAAAATGCCCTACAAAAAGTGCGATCAAAAGAAATTTCTGCAAGAAAAGCTGCAAAGGAATACTCAATTCCACGCAGAACCCTACGGCGATACTCCGTCACAATCGAGAAGGCAAAACTGGGGAGGAAAAGTACTCTAACACCAGTCCAAGAAGTAGAGCTTTGCAAACGTTTACAGCGATTGGCGGAAGTTGGATATCCATTGACAACAAAGGCAACACGCTTGaatgtttataaattttgcACGCAAAATAATATTCCACACCAATTTGCCTCTGTAAAAAGCGCGGCAGGTCGAAAATGGATGTGTTCATTTTTAAAGCGGCAACCACAAATTTCAGTCCGAAAATCCCAGAACTTGAACCCAGCTCGAGCTCAAAAACTTAATAGATTTATAGTGACGGACTACTTCGACAAATTACAAAAAACCATGGCGGAATTGGACTTAATGGGCAAACCTGAGAGAATCTACAACATGGACGAAAAAGGATGCCGACTCAGCCTGCACAAACCGCCTTCTGTTCTTAGAACCAAAGGGGTGAAAAGAGTCCACATTGTTGCAAACGAGCATGGGGAAAATGTCACAGTAGTTGCATGCGGCAACGCAACCGGCGCGACCATTCCTCCCATGGTTTTGTTCAAAGGGGTGAGGATGAAGCCAGAATTCATTGATGGCCTTCCACCATCTTCTGTTTGCCAAATGACCCCTAAGGGATCAATGACCTGCAAGAGTTTCGTAAACTGGATCCATCATTTTGCGAATTTTAAGCCTTCAGGCCCATCTAACACCACGCATGAGCTACAGCCATTCGATAGGTCAGTATTTCGTTCATTCGAGATTTATTGGGACCAAGAAGTTCTCCGCTACTGGACTAATCACGGCGATCGAAAATTGACAAAGCAGCGATTCGGAGCCATATTTTCGACGGTATGGGACAAAGCTGCGACCCCAAAAAATGTTAAGGCTGGGTTTGAAAATACAGGGATTTTTCCTTTTAACCCCGACGCTATTCCTGACATAGCATATGCAAGTGAGATGCCAGCAAGATCTTCAACCTCCGACAAACAGCTTGATTCCACCCATGTTCGCATTCTGGAAGAAGAACATGTCAACGGGGAGATAGAGGCAATTGTGGAACTAGAATCTTCGGATGATGAAGACTTAAATGGAAACAGgctaaaaattcaaaatggcgCAAGTTGCTGA
Protein Sequence
MVLEAILRDELEKSVIINGFRTCGLYPFCPDNVNYDKCVLDTHRSTHSLAHSTKTDPRHEYLENLLGSEIVASFNEDAERMKDSPYFKLWLKSKEACFKVPNPENMPRLNMEQPLSTENSYEYEPVDILGENITEEPLSAENSNEPVDNLGENITEEPLSAENSNEPVDNLGENITEEPLTAKNSLSNPENMPRLNTEQPLSTENSYEPVDNLGENITEEHLSADNSYEPVGKTEQLAKVLSPETDGKGVPSPLPGLITNRPTCRAVTSEGEAQQVLECVQGPCQSTDPKDIDAFISKDKKVKCMLVQFLDDKQMEIVMGKSTSHEMWQALIDIYEDKGISAQLAIRKKIAVLKMSEGADVDAHCTNLMELVRQLKETGTSISDDEIICTLLLSLPTSFETVVTLIENLDIKSLTYETVRNKLRSFGNSKKTPEENLIIPATRKRGTWTNANLQNALQKVRSKEISARKAAKEYSIPRRTLRRYSVTIEKAKLGRKSTLTPVQEVELCKRLQRLAEVGYPLTTKATRLNVYKFCTQNNIPHQFASVKSAAGRKWMCSFLKRQPQISVRKSQNLNPARAQKLNRFIVTDYFDKLQKTMAELDLMGKPERIYNMDEKGCRLSLHKPPSVLRTKGVKRVHIVANEHGENVTVVACGNATGATIPPMVLFKGVRMKPEFIDGLPPSSVCQMTPKGSMTCKSFVNWIHHFANFKPSGPSNTTHELQPFDRSVFRSFEIYWDQEVLRYWTNHGDRKLTKQRFGAIFSTVWDKAATPKNVKAGFENTGIFPFNPDAIPDIAYASEMPARSSTSDKQLDSTHVRILEEEHVNGEIEAIVELESSDDEDLNGNRLKIQNGASC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-