Pgib006710.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- -
- Assembly
- GCA_963971405.1
- Location
- OZ020485.1:51575707-51576090[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-14 1.5e-11 44.3 0.1 3 38 20 55 18 62 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGTAAATACATTCCGGACCCCAGGGGTAAACGATACAAGCCTTTTGATCAGGAAAAGGTGGCTTTGGCTCTCAAATCAATTCGAAATGGCTCGTTAAGCATTCGAAAGGCGTCAGCTCGATACGAAATATCTTATTCGGTTCTTCAGCGCCGTGTTAAGAACCCTGACACAAGAAAGCAAGGAGGGCAAACAATACTCAGTTCTGAAGAGGAGGAACACATTGTAAAACGGTTGGTAATGTGTGCTGAGTGGGGGTACCCAATGGACCTTTACGACTTAAGATTACTAGTCAAAGGGTACCTAGATAGGCGGGGAAAGTTGAAAAAAAGTTCAAAGACAATTTACCCGGCAGGGCATTTGCAGATGCATTTTTGTTGA
- Protein Sequence
- MPRKYIPDPRGKRYKPFDQEKVALALKSIRNGSLSIRKASARYEISYSVLQRRVKNPDTRKQGGQTILSSEEEEHIVKRLVMCAEWGYPMDLYDLRLLVKGYLDRRGKLKKSSKTIYPAGHLQMHFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01271878;
- 90% Identity
- iTF_01271878;
- 80% Identity
- -