Pgib010777.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- bab2
- Assembly
- GCA_963971405.1
- Location
- OZ020487.1:15735197-15750117[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-11 1e-08 35.2 0.0 1 38 476 514 476 519 0.90 2 4 4.8e-12 1.1e-09 38.4 0.2 1 39 530 568 530 571 0.95 3 4 1.6e-15 3.6e-13 49.5 0.0 2 45 586 630 585 630 0.97 4 4 3.7e-18 8.2e-16 57.9 0.1 1 43 637 680 637 682 0.96
Sequence Information
- Coding Sequence
- ATGGCTGGCCAGCATTACTGCTTACGCTGGAACAATTATCAGAGCAATATGACGTCTGTCTTCCACCAGCTACTACAAACTGAAGCCTTCGTCGACGTGACCCTTTCCTGCAACGACAGCGCACTCAAAGCGCACAAGGTTGTTCTATCAGCCTGTTCATCCTACTTCCAGAAGCTTTTGATGCAGAACCCTTGCAACcaccccaccatcattctaccCCCGGACGTCTCCTTCAATGACCTCCGAGTCATTATCGACTTCGTCTACAGGGGCGAAATTGACGTAGACCAGGCTCAACTACAGTCTCTTCTAAAAACAGCAGACCAATTGAAGATCAAGGGGCTCTGTGAAGTATCAGATTCAAGAGAAAACGAAGAACCAGATCCTCTTAACAATAAGGTCCCAGAACATTTGCTAGGACCAGAACACAACATAAAAACGCTGAGTTTCGAGAATGTTCTCCAACCACTGAGCTTCAAAAGTGCGTTTGCGTCCACCCCAGAACTCGCATTTAACCagATAAGCAGAATCAAGCAGAGCTGCAGCCCCCTGAGTTTCCCACAAGAAGGCTTCGTTTCAGTTCGAACTATACCCGACAGCAAAGAAACATTCACTTGCGGGGAAATTCAGAGCAAACGTACATCTTCTAAAGGtaAACTGGTGAACAACAGCACCAGCACCACGTTCGGTGGAGGACGTAACAGCCCCGTGCGTAAGAAGCCACGGCCGTCTCTCAAGGACCGTGCCGTCCAGAGCGACTCCTCGGACCCCATGAACGGGCTTCCACAGGCCGTCGCCATGGGCAGCCTCGGCGAGTCCGTCAGACACGAGCCACAAGTCTGGCGCTGGATCCACAGTGGTGGCGAGAGAGTACCTGAATGTATAACAGTTGCCACATCCACGGACGAGGACCAGAAGAACATTCCGATGGTCATTCTGGAGCGGCCAGTCGGCAGCATGCCTACCATGATTGTACATAATATGCCTCATCCAATGTCTCCTCATGTCGATACCGGGAACAGCAATACTAGCTTGCACAGCTCGGGGGAGCAGACACCCCCTGACGTAGACATCCCGCCTGAAGCGCAGCCGCAACCGCCTAGTGCAACGTTAGTCGAGAACCTGGACTTGACGGACCAGCAGGAGCCCGAGGTGACGGAGGCGGACGCGGACGACAGCGACCACGTCAAAGTCAAGTTCGAGACGCTGCGGTCCGTGGAACAGGGGGGCGACACTGTCGATATGGACACGCACATGTCCGAGACCCGGAATCAAGAAGAATCTGAAGCATCTATGCAGACAATGATGATTACTCCAGAACTTTTAGGTCTACTCCCGCCAGGATCCAGCAGTACCGGTAGTTTGTTCATTACAATAGCTTTACACGGCGGAGAAGGCGACGGAAAAAGTGGAGGGAAAGGCTGGACTCAAGAGGACATGGACCTGGCCCTAGATGCCTTAAGGAACCACAACATGTCGCTTACGCGTGCTTCCGCCACCTACGGTATTCCCAGCACGACGCTGTGGCAGCGCGCGCACCGCATGGGCATCGACACGCCCAAGAAGGAAGGAAGCACCAAAAACTGGACCGAGGAGAGCCTTAACAGCGCCCTGGAAGCTCTCAGAACAGGCACCATATCCGCCAATAAAGCGAGCAAAGCATACGGTATACCTAGCAGCACATTATACAAAATAGCACGGAGGGAGGGAATCCGACTAGCAGCGCCTTTCAATGCCGCGCCAACGACTTGGAGCCAGGAAGACTTGGACAGAGCTCTAGAGAGCATTCGCAGTGGCCAGTCTAGCGTGCAGAGGGCTTCCGCTGAATTTGGCATTCCGACAGGAACCCTATATGGAAGGTGTAAACGGGAAGGAATAGAATTAAGTAGAAGCAACCCAACGCCATGGAGTGAAGACGCCATGGGGGAGGCATTAGAAGCAGTACGAATTGGACAAATGAGCATTAACCAGGCAGCCATCCACTACAATCTTCCATATTCATCCCTCTACGGTCGGTTCAAACGTGGCAAATATGAGGCTGAAGAGGGAGTACCAGGCGAAGAAATAACGCAAGGCATGATGGTAGTAAATTATCCAGAAGAATATAGCGGTATCTCGGCTTACCATCAGCCCGGCAGTTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLSCNDSALKAHKVVLSACSSYFQKLLMQNPCNHPTIILPPDVSFNDLRVIIDFVYRGEIDVDQAQLQSLLKTADQLKIKGLCEVSDSRENEEPDPLNNKVPEHLLGPEHNIKTLSFENVLQPLSFKSAFASTPELAFNQISRIKQSCSPLSFPQEGFVSVRTIPDSKETFTCGEIQSKRTSSKGKLVNNSTSTTFGGGRNSPVRKKPRPSLKDRAVQSDSSDPMNGLPQAVAMGSLGESVRHEPQVWRWIHSGGERVPECITVATSTDEDQKNIPMVILERPVGSMPTMIVHNMPHPMSPHVDTGNSNTSLHSSGEQTPPDVDIPPEAQPQPPSATLVENLDLTDQQEPEVTEADADDSDHVKVKFETLRSVEQGGDTVDMDTHMSETRNQEESEASMQTMMITPELLGLLPPGSSSTGSLFITIALHGGEGDGKSGGKGWTQEDMDLALDALRNHNMSLTRASATYGIPSTTLWQRAHRMGIDTPKKEGSTKNWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSQEDLDRALESIRSGQSSVQRASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYEAEEGVPGEEITQGMMVVNYPEEYSGISAYHQPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01272287;
- 90% Identity
- iTF_01272287;
- 80% Identity
- iTF_01272287;