Pgib007155.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- Kdm5
- Assembly
- GCA_963971405.1
- Location
- OZ020486.1:5157393-5159636[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 4.8e+03 -1.5 0.0 53 65 47 59 40 70 0.74 2 2 5.8e-13 1.8e-09 38.3 0.0 2 50 97 144 96 166 0.86
Sequence Information
- Coding Sequence
- ATGGAATACAGAGCTTGTCCTCATTTTCGGAAATGTTATGACGAGGTGACTGCAAAACAGTTCAAGTTTAAGCGTCCACCAGAATGCCCTGTGTTTGAACCCACCAATGAAGAATTTGGAAATCCAATACAgtatattaataaaatacgagATGTAGCGGAAAAGTTTGGGATATGTAAAATTAAGCCGCCACCCGACTGGCAGCCTCCGTTCGCAGTCGACGTCGACAAATTTAAGTTTACCCCTCGTATGCAGCGGCTCAACGAATTGGAGGCGCAGACAAGAGTCAAATTGAATTTTCTAGATCAAATCGCGACGTACTGGCGTCTGCAAGGGATACCCCTAAAAATACCGACTGTGGAAAAGAGAACATTGGATCTTTACGTTCTATATAATCTAGTAGATGAAAACGGGGGGTTGCCAGAGATTGACATACTGGCCCTTCTGGAACAGCTAGCTAGTAAAGGATGGGAACACCAATATATTTGGATTAAGACACATATTGGGATCGTAGGGAACGAGATGGCAGACGCTTTGGCCAAGGAAGCCACCCGTCGTAGGTGCATTGACACGCAGGACTCAGTATGTCCCCCGTCCGACTTGGGTTTACACATAAGACAGACACTGTTGGTGAAGTGGCTAGGACCAGTATAA
- Protein Sequence
- MEYRACPHFRKCYDEVTAKQFKFKRPPECPVFEPTNEEFGNPIQYINKIRDVAEKFGICKIKPPPDWQPPFAVDVDKFKFTPRMQRLNELEAQTRVKLNFLDQIATYWRLQGIPLKIPTVEKRTLDLYVLYNLVDENGGLPEIDILALLEQLASKGWEHQYIWIKTHIGIVGNEMADALAKEATRRRCIDTQDSVCPPSDLGLHIRQTLLVKWLGPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -