Pgib004849.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- retn
- Assembly
- GCA_963971405.1
- Location
- OZ020485.1:18180278-18195277[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-20 1.1e-16 61.4 0.0 18 89 34 103 17 103 0.90 2 2 2.3 7.3e+03 -2.1 0.0 21 33 251 263 233 265 0.73
Sequence Information
- Coding Sequence
- ATGCATCTAATATCGTCAGGTAATAAGAAAGAAATCTACCCACATATCGAGGAAGAAATTAGTCGCAAAATGCTCAGTTTCATATCAAGTCCTCCACCAACCCCAATAACCAGGCTGCCCATCATGGCTAAACAGGTCCTCGATCTCTATGAACTGTTCAAACTCGTGACAGCCCGCGGCGGAATTGTCGAAGTCATACAGAAGAAGCTGTGGCAGGAAATCATAAAAGGACTAAATCTACCCAACAGTATTACTTCCGCAGCCTTCACTCTGAGAACACAATATATGAAGTACCTGTATAATTACGAGTGTAATAAGTTCAACTTGAGCACGGAAGCGGAGCTTCAAACGGCTATTGACGGCAACCGGCGCGAGGGACGGAGGACGACCTACCCTGCGTCCGCCTACCCCGATCTCATGAACCAGTCCACAGGACCTCACTTACCCCCACATCTTGGTCATAGACCTCACATGAACGGAAATGGTCATATGTCACATCCGGTATTACACCCGGCGCTGATGGCTACTCAACCTCCAGGATCCAcagTGGGCCCGCTTCACGCCATGTCAGCACCGCACGTGAATCAGGCGGTCTATAACGAGTACTGCAGACGAATGGGAGTGGATGTCCCAGGTGGGTCGCCACCCTTGCCCCAGAATTCGCCACCCGGGACCGTGTCGCCACGTGATGTTGTCCGTAACGCCCTTGAGATTCATCAGTACAATGCCCTCAAATTATGGCTTGGAAACAACAACTTTCCTAATGTTGCACAAGAGCCGTTGGACCttggaaaaaaagaagaaaacaggCGGTTGGCCCCCGGGAAACGCCCGAGCACGAGCTCCCACGAGAATAATGTCGCAGAAACACCTTGTGCCAAAAGCCTGCGATTGGCCAATGAAAGGGAGGAGAGGGAGAGGGAAAGGGAAAGGGGCAGTGTCAACAGGGCGCCAAGTGGTGGGGCCCAAATCAACAGCAATGGCACCGAAGGCCCGCATCAAGAAGGAGGCATTACCGTTACAATGCAGATTAACGGCGACGCTTACGAGGGGGTCCTTTTCAAAAAGGAACGACAATAA
- Protein Sequence
- MHLISSGNKKEIYPHIEEEISRKMLSFISSPPPTPITRLPIMAKQVLDLYELFKLVTARGGIVEVIQKKLWQEIIKGLNLPNSITSAAFTLRTQYMKYLYNYECNKFNLSTEAELQTAIDGNRREGRRTTYPASAYPDLMNQSTGPHLPPHLGHRPHMNGNGHMSHPVLHPALMATQPPGSTVGPLHAMSAPHVNQAVYNEYCRRMGVDVPGGSPPLPQNSPPGTVSPRDVVRNALEIHQYNALKLWLGNNNFPNVAQEPLDLGKKEENRRLAPGKRPSTSSHENNVAETPCAKSLRLANEREERERERERGSVNRAPSGGAQINSNGTEGPHQEGGITVTMQINGDAYEGVLFKKERQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -