Ppal002131.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- grn
- Assembly
- GCA_014825455.1
- Location
- QVNV01019181.1:1-2003[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-15 4.2e-12 45.7 2.2 1 33 134 165 134 167 0.94 2 2 4.1e-18 1.1e-14 53.9 8.4 1 35 197 230 197 231 0.97
Sequence Information
- Coding Sequence
- GTGGAATCACCCGGTAGCACGTACATGAAGAGCGATCCCACGTTAACTTCATCCCTAACTGCCACCCGCGCGGTGCCACTGTACGAACAACCTGGTTCACCGGGTTCTCAACCCGGATTGACTTTGTACGGCGCGGGATCCTACCAATACGTGAAACCACCGTCGTCAGGTGACGTTTACTGGCAAGCCGGTAGTACACCCTCGCCCCCAATGGATTACGTCCAGCAATATCAGAATAGCGTCACCGCGATTTCTGTCACTGACGCCAATATGCAACTCTATCCGGGCGGATACATTTCGTCGAGCGCGAACGGACCACCTTCCGCATGGGCTACCATCCCGCTTTCCGGTCCTGACGACGCGTTCGAAGGACCTGTAATGGCGGCGGAACCGAAAGAGTGTGCCAATTGTGCAGCGTCGATGACGCCGTTGTGGAGACGCGACGGATCTGGTCACTATCTGTGCAACGCTTGCGGGATTCATGGCAGAATCAACGGAATGAGCAGACTGGGATCCATGAGATGTTCCAAGCCGAAGCAGTCGGTCACGCCGGTAAACATTACCGGCGTGCGACGGACGGGGGTTCAATGTGCAAATTGCAGGACCAGCACAACGACGCTCTGGCGTCGGAACAACAACGGCGAGCCAGTTTGCAACGCGTGCGGACTTTACTATAAGTTACATAATAAACAAATAAATAAAAATAATTTGATGATGAAACCAGTAATAAATGCATAA
- Protein Sequence
- VESPGSTYMKSDPTLTSSLTATRAVPLYEQPGSPGSQPGLTLYGAGSYQYVKPPSSGDVYWQAGSTPSPPMDYVQQYQNSVTAISVTDANMQLYPGGYISSSANGPPSAWATIPLSGPDDAFEGPVMAAEPKECANCAASMTPLWRRDGSGHYLCNACGIHGRINGMSRLGSMRCSKPKQSVTPVNITGVRRTGVQCANCRTSTTTLWRRNNNGEPVCNACGLYYKLHNKQINKNNLMMKPVINA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -