Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.039 2.1e+02 2.3 0.1 23 29 1 7 1 7 0.87

2 5 1.1e-19 5.8e-16 58.5 8.3 1 29 20 48 20 48 0.98

3 5 5.8e-18 3.1e-14 53.0 5.2 1 29 65 93 65 93 0.97

4 5 1e-18 5.7e-15 55.3 6.5 1 29 126 154 126 154 0.97

5 5 0.013 70 3.9 0.0 19 28 181 190 174 191 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.039	2.1e+02	2.3	0.1	23	29	1	7	1	7	0.87
2	5	1.1e-19	5.8e-16	58.5	8.3	1	29	20	48	20	48	0.98
3	5	5.8e-18	3.1e-14	53.0	5.2	1	29	65	93	65	93	0.97
4	5	1e-18	5.7e-15	55.3	6.5	1	29	126	154	126	154	0.97
5	5	0.013	70	3.9	0.0	19	28	181	190	174	191	0.73

Coding Sequence: CTGTCTGGATGTCCACGAGCTGACCGCTCGCAAATCCAGGCGCATTCCCAGGAGCTTAAATGTCCCACGCCAGGCTGCGACGGGTCTGGACATGTCACGGGAAATTACTCGTCGCACAGAAGTTTGTCCGGCTGTCCACGAGCGAACAAGCCAAAGAGTAAACCCCGAGATGGTCAAGATTCTGAGCCCTTGAGATGTCCAATTCCGGGTTGCGACGGGTCCGGCCATGCCACCGGCAAATTCTTGTCGCACCGCAGTGCATCTGGATGTCCAATAGCGAATAGAAATAAGATGCGAGTGTTGGAGTCAGGCGGTACAGTCGAGCAGCACAAGGCAGCCGTAGCCGCTGCGACAGCCATGAAATTCGAGGGTGTCAATTGCCCCACGCCCGGGTGCGACGGGCTCGGCCACATTAACGGTTCCTTTCACAGTCATAGATCCCTGTCGGGCTGTCCGATAGCCAGCCACACCGTGAAGAAATCAAAACCGGAGGATAACATGAGCATGTACAGCAGAGGAATCACCGGTGAGGATCGAGTTACTTCTGATGACGCTTCCGGCTGTCCATACTTAACGATCGAAGAATAA
Protein Sequence: LSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGLGHINGSFHSHRSLSGCPIASHTVKKSKPEDNMSMYSRGITGEDRVTSDDASGCPYLTIEE

Sequence clustering based on sequence similarity using MMseqs2