Basic Information

Insect: Pseudomyrmex pallidus
Gene Symbol: Mtf1
Assembly: GCA_014825455.1
Location: QVNV01005726.1:5376-9689[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00017 0.017 15.9 1.1 1 23 131 155 131 155 0.96

2 6 0.00027 0.026 15.2 0.2 1 23 161 185 161 185 0.95

3 6 0.00023 0.023 15.4 2.2 1 23 191 215 191 215 0.97

4 6 4.5e-06 0.00044 20.8 1.0 1 23 220 244 220 244 0.96

5 6 7.9e-05 0.0077 16.9 5.3 1 23 250 274 250 274 0.98

6 6 6.7e-05 0.0065 17.1 5.9 1 23 280 304 280 304 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00017	0.017	15.9	1.1	1	23	131	155	131	155	0.96
2	6	0.00027	0.026	15.2	0.2	1	23	161	185	161	185	0.95
3	6	0.00023	0.023	15.4	2.2	1	23	191	215	191	215	0.97
4	6	4.5e-06	0.00044	20.8	1.0	1	23	220	244	220	244	0.96
5	6	7.9e-05	0.0077	16.9	5.3	1	23	250	274	250	274	0.98
6	6	6.7e-05	0.0065	17.1	5.9	1	23	280	304	280	304	0.97

Sequence Information

Coding Sequence: ATGGCGACGTGGGAGAGCGACAAGTTTCAAGACGACGGGAATGCCGACGATATAGATGACAATTTCGACAATATCCTTGTAACGCACGATCTGCAGGACTGTCTGGATGACAGTCTGGACTTGTCGAGCTTCGAAAAGGTTTACGAGCAGAGCGCGGTGTTTGATTACGAGAAGTACGACGACGACGACGACGCGCGCGATGTTGCTATCAACGAAAAGCTATCCGCTGCCGATGACAACACGACCGGACTTGTCCATCACACAATCAGTCCAGAAGAATTTTATATGCGAATTCATCAAGAACAGGATAACGCAGTATCTGAAGATCATGCAACTTCCAATAAAATTGAGAGTATGGATGCCGATACCAATCAGAAGCATATCAATCGCTATAACTGTCAATATAAAGGTTGCGCCAGAACATATAGCACTATTGGAAATTTACGCACTCACATGAAAACACATAAAGGCGAGTATCGATTTAAATGCGCAGAGCCGAGTTGCGGCAAGGCCTTTCTCACGTCCTACAGCCTAAAGATCCACATTAGGGTACACACAAAAGTAAAACCATTCGAATGCAACCACAAAGGCTGCGAGAAAGCGTTCAATACCCTTTACAGACTGAGAGCTCATCAGAGACTCCACAGCGGCAACACATTCAACTGCGAAGAGACTGGATGCGTTAAATTCTTCACTACTCTAAGCGATCTCAAGAAACATATACGCACTCATACTCAAGAAAGACCGTACAAGTGCCGAGAAAAAGGTTGTGGGAAAGCCTTTACAGCTTCACATCATTTAAAAACGCACAAAAGAACACATACGGGCGAACGGCCGTATATATGTACCTTCGAAAATTGCAAACGATGTTTTACCACTCCTCATAGTTTAAAGAGCCATATAAAAACGCACAACAAAGTTATGAATAATGAAACAAAACCGAAGACCAATGGAGATGACATGGCTCAGAGACAAAAAGTGTTAACACAATTAGAATTAAAACTCATAAAAGTCAGCGACACTAATAATTTACCATCGTCATACGCCGTCGTACCGATATCCTCAGACCTCACGCAAAATAACAGAAATATGTCGTACATGTCCACGGAGAATGCGGCGGGGCAAGCTATTTCCACGAACGTAACAATGGATATTATGAGCAAGATGAATGCAAAACTCGATTATATTTCTACCAAAGATGCGGAAGACTCAAATAGAAACAACGACGTTGCACTTCTCGCAACAGACATTGTTTTAAATAATAATTTTAACGAACACGCGATCGCGGACGCTTTTAATAATAACGAAGTCTATAATGACTTTAAAGTATTCAATGAAATGACTGGAAACGTGCAACACGATAATGTAACGGATATAGCCGGACATCAACGGCACAAGTCGGTTCCATTATCTGAAGCGCGTAGCGATAGTATAGATAGGCGGGACCGATCTATCCCGATAAATTTAGAACAGAAAGTTATGCAAGATAACTTGCGGAATACGATGACTCAGATTTCTAGAGGGACAGATTTTACGTCTAATATGAAACAGTACAAAAACAACGAATCCACCACCTCTCCCGACGATGTATTCGCGAAACAATCTACCACGGAAGATATAACTAGTAGTGGCAGCGATGCGTTATATAGTGCCAACTGTATTACTAGTCATATTCCCGATATTATAAGTTCTTCGAATGAAACTCACCTATTTGAGACCGGAATAGAAGCTCTTTCGTTCATCGATGACGCGACCTTGCAAAATGAGCCTCTCGACGCGGTCTCGAATCACGATTTAGGCGCGGACGCTGCTACGAATGCGCAATACGAAGCCGTCGAACTCGCGATAGCAACGGAAGAGGAATTACCTTCACCCTGGGTAGATGTTATGGCATTGGCAACTGCTCCCGCGTTGAGAACGCAATCTTGGTCAGAATTAAACGCTTTTCCTACAGCAGTTCATTCCCTGGTCGATCTGGTAGGTCCGGAACCTTATCCCTTAGAGATAGAGTCTCAGTCTACGGAGAATTTGAAAAATGTTAACGCAATAAATACGGAACACAATCCGATTGACACCGAAATTGTGCAATGCCAGAAAACCGCCGATTATGAGAACAAAACGGATAACGTAAAGAACAAGAAGAACAGAAATGTACTGCAAGAGATTACGGCGGACGCTGATATATGTAAGTGTGTCGATTGCAAGTGTGATAACTTGCAAAATTGTCAAAACTGCACGAACAACAGCTCCGTCGAGGAGGTTAAGAAGAAAGACACGATGAAAATTGTGAGCGACTTTGTATCCTCTCTCCAAAGTGGATGTTCCTGCAACACCGAGACCGGTGGTTGTGATTCTTGCTGTGTTGTAATTTGTCTGAAGACATTGCAGCAGCTACAGAAAGTATTTAGTAATTGTTGTAAAAATACTACTAGCGCTACTACAACCACATGTTGTAAAGAAAAATTGCTACCATCCTTGATAAATTATCAGCTAGCTAGAGAAGTCAATGAATCATAA
Protein Sequence: MATWESDKFQDDGNADDIDDNFDNILVTHDLQDCLDDSLDLSSFEKVYEQSAVFDYEKYDDDDDARDVAINEKLSAADDNTTGLVHHTISPEEFYMRIHQEQDNAVSEDHATSNKIESMDADTNQKHINRYNCQYKGCARTYSTIGNLRTHMKTHKGEYRFKCAEPSCGKAFLTSYSLKIHIRVHTKVKPFECNHKGCEKAFNTLYRLRAHQRLHSGNTFNCEETGCVKFFTTLSDLKKHIRTHTQERPYKCREKGCGKAFTASHHLKTHKRTHTGERPYICTFENCKRCFTTPHSLKSHIKTHNKVMNNETKPKTNGDDMAQRQKVLTQLELKLIKVSDTNNLPSSYAVVPISSDLTQNNRNMSYMSTENAAGQAISTNVTMDIMSKMNAKLDYISTKDAEDSNRNNDVALLATDIVLNNNFNEHAIADAFNNNEVYNDFKVFNEMTGNVQHDNVTDIAGHQRHKSVPLSEARSDSIDRRDRSIPINLEQKVMQDNLRNTMTQISRGTDFTSNMKQYKNNESTTSPDDVFAKQSTTEDITSSGSDALYSANCITSHIPDIISSSNETHLFETGIEALSFIDDATLQNEPLDAVSNHDLGADAATNAQYEAVELAIATEEELPSPWVDVMALATAPALRTQSWSELNAFPTAVHSLVDLVGPEPYPLEIESQSTENLKNVNAINTEHNPIDTEIVQCQKTADYENKTDNVKNKKNRNVLQEITADADICKCVDCKCDNLQNCQNCTNNSSVEEVKKKDTMKIVSDFVSSLQSGCSCNTETGGCDSCCVVICLKTLQQLQKVFSNCCKNTTSATTTTCCKEKLLPSLINYQLAREVNES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01270063;
90% Identity: iTF_01267821;
80% Identity: -