Basic Information

Insect: Pseudomyrmex pallidus
Gene Symbol: ZNF236
Assembly: GCA_014825455.1
Location: QVNV01025296.1:4759-9943[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.9e-07 1.8e-05 25.2 0.5 1 23 48 70 48 70 0.99

2 17 0.00043 0.041 14.6 0.8 1 23 76 98 76 98 0.99

3 17 3.1e-05 0.003 18.2 2.4 1 23 109 131 109 131 0.98

4 17 0.0038 0.37 11.6 6.8 1 23 186 208 186 208 0.98

5 17 1.5e-05 0.0014 19.2 4.8 1 23 214 236 214 236 0.99

6 17 7.3e-06 0.00071 20.2 2.1 1 23 242 264 242 264 0.98

7 17 0.00028 0.027 15.2 7.6 1 23 270 292 270 292 0.98

8 17 0.71 69 4.5 1.7 2 23 641 662 640 662 0.88

9 17 1.4e-05 0.0013 19.3 2.7 1 23 668 690 668 690 0.98

10 17 0.0018 0.17 12.7 0.5 2 23 697 718 696 718 0.97

11 17 2.2e-08 2.1e-06 28.1 1.4 2 23 789 810 788 810 0.98

12 17 0.00043 0.041 14.6 3.8 1 23 816 838 816 838 0.99

13 17 1.9e-05 0.0019 18.9 2.2 1 23 844 866 844 866 0.98

14 17 1.2e-05 0.0012 19.5 2.8 1 23 872 894 872 894 0.98

15 17 6.3e-07 6.1e-05 23.5 1.6 2 23 1134 1155 1133 1155 0.97

16 17 7.9e-05 0.0077 16.9 5.4 1 23 1161 1183 1161 1183 0.98

17 17 0.00075 0.072 13.8 4.6 1 23 1189 1212 1189 1212 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.9e-07	1.8e-05	25.2	0.5	1	23	48	70	48	70	0.99
2	17	0.00043	0.041	14.6	0.8	1	23	76	98	76	98	0.99
3	17	3.1e-05	0.003	18.2	2.4	1	23	109	131	109	131	0.98
4	17	0.0038	0.37	11.6	6.8	1	23	186	208	186	208	0.98
5	17	1.5e-05	0.0014	19.2	4.8	1	23	214	236	214	236	0.99
6	17	7.3e-06	0.00071	20.2	2.1	1	23	242	264	242	264	0.98
7	17	0.00028	0.027	15.2	7.6	1	23	270	292	270	292	0.98
8	17	0.71	69	4.5	1.7	2	23	641	662	640	662	0.88
9	17	1.4e-05	0.0013	19.3	2.7	1	23	668	690	668	690	0.98
10	17	0.0018	0.17	12.7	0.5	2	23	697	718	696	718	0.97
11	17	2.2e-08	2.1e-06	28.1	1.4	2	23	789	810	788	810	0.98
12	17	0.00043	0.041	14.6	3.8	1	23	816	838	816	838	0.99
13	17	1.9e-05	0.0019	18.9	2.2	1	23	844	866	844	866	0.98
14	17	1.2e-05	0.0012	19.5	2.8	1	23	872	894	872	894	0.98
15	17	6.3e-07	6.1e-05	23.5	1.6	2	23	1134	1155	1133	1155	0.97
16	17	7.9e-05	0.0077	16.9	5.4	1	23	1161	1183	1161	1183	0.98
17	17	0.00075	0.072	13.8	4.6	1	23	1189	1212	1189	1212	0.97

Sequence Information

Coding Sequence: CAAAATATCTCTTTGCTCGCAGAAACTGCGGAATCGAAAAAGACCGAGTCAACGTCATACGTCACGATATTGGACAAAACTGCAAACGGTACTTCAAGGAACTTTACCATAAAGCAACATTACATAGGAAACGTACGTTGGTACACGTGTTTGTACTGCCCGAAGGAGTTTAAAAAACCGTCGGATTTGATACGTCATCTGCGTGTCCACACACAGGAGAAACCCTTCAAGTGTATGTACTGCGTGCGATCCTTCGCGCTGAAATCGACGATGATAGCGCACGAGCGAACTCACAGCGGATTGAAGAAATTACACACGAAACCACATAAATGTAACATATGCGACATGTCGTTCAGTTCGAGCACCGTTCTCAAGAATCATGTGAAGAGTCACGCGCGAGAGAAGCCGAAGATAACGCCTGAGACGGAGTGTTTGATACCGCAGGTGGTGTTGCAGGAGCCGCTCGTAATCAGCGACGCTGATAATAAAATTAGCGTGGCGCAAGTGCAATCGAAACAGAAACAAATGTACGAGAGCGTCGGCGTGGCCAGGCCGCACGAATGTTCCGTCTGTCACGCGGCATTTCGCAAAGTCAGTCACCTGAAGCAACATTTCCGCAGGCATACGGGCGAGCGGCCTTACAAGTGCAACAAATGCGACAGGAGATTCTCGTCCAACAGCGTTCTCAAATCTCATCTGCACACTCACGAAGCTGCGAGACCGTACAGTTGTTCGGTGTGCAACACAAAATTCTCCACGCAGAGCAGCATGAAGAGGCATTTGGTCACGCATAGTAATAAAAGGCCGTTCATGTGTCCATATTGTCACAAAACGTTCAAGACGTACGTTAACTGTCGCAAGCATATGAAAATACACAAACATGAGTTAGCACAGCAGCAATTGGAGGTGCAAAAGACACAGGAGAAGCAATCTCCAGTCGAGGACAAAGCTGCTTCTTCAACATTACCGGAAACTATTTCCCTTCCCGAAAATATGGATGTGTCGTTCCAACAACAAATAGCTTCAGACTTCACGCATGCTTTTTCCGATCAGTTTCAGAACATCAGCACGGATAAGGAGAAAACCTTCTTGTTAACGGATACTATAACATCGACTCAAAATTTATCCGTTGAGGCAACTAATTTGGGCTCAGCGCAAACCTTACACGCCGACGAAACCGGCACCATTACGTTGCCTCAGTATCCGGGGGATCAAACTTTAACGCCGGAAAACATACGAGAGATCGAGGAAACTTTGAATCAACAATTGTTTAATATTGGCATGAATCTCGGGGTGGGAACGAACAATCTTTCGAGACAGATAGACGAGGCAAATATAAGCACTCTCGACGGCGTCAAAGAACAGCCGGTGTTGAACATAATATACGATCACAACAAGACTCTGGACGCATCAGGCAACGCCATTTTCACGCCGCAATTCGACACGTTCGACATAGGTCAAATTACGTTGCAGACGAATAACGAGATGGATATCGGCTTGAATCCGAGCAACTCCGCGCCAACCAACATGTCCGGCGTCCCGTCCAAACCTACAGATGGGAGCAACGGTCAGCAGGAGGAACGAGAAACCGCTTCGGTTACCACCGTCAGTAACATAGACGCTTCTCAAGTGATAAAGAACGCCCATCTCATGCTGATAAACCCCAAGGAAAATTGTTCGGAATTGATAAAACTGTCGCACGTGCCTTCGAAAACCGCGAAAGCGGACACCGCGAACGAAATAGAAATGCAAGTCATCAACGAGGAAGCGCAACAGAAAAGTAACGCTGTTTCGTGCGAGAACGAAAGAAGCCCTTCGTCTCTGTTCATGGAGAACTTTCAAAGTACAATACAATCGGACATGCTCATCTCCTCTGACATGAATAATCTGACCAAAATGTCGGAATGCAACACTCTGTTGCAATGTCACATGTGCAACGATCGAGGTTTCACCACGGAAGGATTAAAGGAACACTTGAAATCTCATCGCGGAGCGAAAGAATTCGAGTGCTCGGAATGTTCTCAGAGATTCTGCACAAACGGTGGCCTCAGCAGGCACATGAAGATGCACACAAATAAGCAACAGTGGAAATGCACGATCTGTCAGAAGGTGCTGGGCAGCAAGGTGCAATTGAAGCTTCACAGCAAGATGCATACCGAGAGCTGGAACGTCGTCTCGTTCGATGGTGATAATTCTCCGAAGGAATTCGCCGCGTCCGCTCTTCCGTCAATAACGCTAGACGTGCGAATAGATCCGGACTCATCGGTGTCCGAGAAAGTTTTGATGGACGCCTTCGCCGAGAAGAAAAGTATAGACCAAGCGGATGAAAATGTGGAAAAGGGAGAAAAGAAGGAATATGTAAATAAATGTAAATACTGTCCGAAAACTTTTCGCAAACCGAGCGACCTTATCAGACACATTCGCACGCACACGGGCGAGCGACCGTACAAGTGTACACGCTGCAGCAAGAGTTTTGCGGTCAAGTGCACTCTCGACTCGCACATGAAAGTTCACACGGGTAAGAAGACGTTCCGCTGCCACGTCTGCACCAGCATGTTTGCCACGAAGGGTAGTTTGAAGGTCCACATGCGTCTGCACACGGGCTCCAAACCGTTCAAGTGTCCCATATGTGACATGCGATTCCGCACTTCCGGTCACAAGAAGGTGCACATGCTGAAGCACGCGAGAGAACACAAAGGTGGCACAAAGCGCAAGCCAAAACACGTCAAGTACGCGGCAGTGGCGGAAGCAGCGGCGAGTTGTGAGAAATTCGACAACAGTTCTCCAAATCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGATACCGCTCCAACGCAAAATTTGGACTACTCTTCGGTGGAGCATACTGTGAATCTCGATACCGCGGTTCACTTGCCCGATCAGATTACATTTAATCAACCCGAGGCAACGACACTTCTCAACAACAACTCCGTGCTGTCAGTGAACGAGAACAACGAGCTGGTGACGAATCTGCAGTTCTTACTGGCAAACGGTTTCGTTACCATTCAGACGGACGACACTCTGCTGAGCGCGCAACCGGCAACGAGCAGCTCAGACACCGGCGGCACCGCGGTGCCAACCAATGTGATGGAATTTGTGAATCCGAATCCTTTCCAAGAAACTTGCAATCTGAGTGATACGAATCACGTGGTGATAACTAGTCAGATACCGGCGACGACAACCGCGAACGACGCGACGGTCATTCAAATGAACGATTGCATGTCTTCCATTCCAATGATGCCGATAGAACAGAATCAAGACGCGAACATCAGCGGCGCGTTGTCCGAAACGAAGACAAACACTCAGTCGACGAAATCCTCAAGAAAGGAATGTGATACGTGCGGCAAAACGTTCACGAAGCCGTACCAGTTGGAACGCCACAAGCGCAGTCACACGGGCGAGCGGCCGTACAAGTGCGAACAGTGCGGCAAGGCGTTTGCTCAGAAGTTCACACTGCATCTTCATCAAAAACATCACACCGGCGATCGACCGTACCCATGTCCACACTGCAAGCAATGGTTCTCGCAAAAGTGCAATCTGCAGACGCACTTGAAGCGCGTCCACAAGTTAGTTTTGCTCGACATCAAGAAGCTGAAGAACAATCAGCAGGTGTTGGGCACGCTTCTGCAGGACGGTCAAGGAGACAACAACGCCAAACTGGTGAACTTGGACGACATACTGGTAGTAGATTTCCTCAAATAA
Protein Sequence: QNISLLAETAESKKTESTSYVTILDKTANGTSRNFTIKQHYIGNVRWYTCLYCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHSGLKKLHTKPHKCNICDMSFSSSTVLKNHVKSHAREKPKITPETECLIPQVVLQEPLVISDADNKISVAQVQSKQKQMYESVGVARPHECSVCHAAFRKVSHLKQHFRRHTGERPYKCNKCDRRFSSNSVLKSHLHTHEAARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEVQKTQEKQSPVEDKAASSTLPETISLPENMDVSFQQQIASDFTHAFSDQFQNISTDKEKTFLLTDTITSTQNLSVEATNLGSAQTLHADETGTITLPQYPGDQTLTPENIREIEETLNQQLFNIGMNLGVGTNNLSRQIDEANISTLDGVKEQPVLNIIYDHNKTLDASGNAIFTPQFDTFDIGQITLQTNNEMDIGLNPSNSAPTNMSGVPSKPTDGSNGQQEERETASVTTVSNIDASQVIKNAHLMLINPKENCSELIKLSHVPSKTAKADTANEIEMQVINEEAQQKSNAVSCENERSPSSLFMENFQSTIQSDMLISSDMNNLTKMSECNTLLQCHMCNDRGFTTEGLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQQWKCTICQKVLGSKVQLKLHSKMHTESWNVVSFDGDNSPKEFAASALPSITLDVRIDPDSSVSEKVLMDAFAEKKSIDQADENVEKGEKKEYVNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCTRCSKSFAVKCTLDSHMKVHTGKKTFRCHVCTSMFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHKKVHMLKHAREHKGGTKRKPKHVKYAAVAEAAASCEKFDNSSPNRXXXXXXXXXXXXXXXXXXXXXXXXXNDTAPTQNLDYSSVEHTVNLDTAVHLPDQITFNQPEATTLLNNNSVLSVNENNELVTNLQFLLANGFVTIQTDDTLLSAQPATSSSDTGGTAVPTNVMEFVNPNPFQETCNLSDTNHVVITSQIPATTTANDATVIQMNDCMSSIPMMPIEQNQDANISGALSETKTNTQSTKSSRKECDTCGKTFTKPYQLERHKRSHTGERPYKCEQCGKAFAQKFTLHLHQKHHTGDRPYPCPHCKQWFSQKCNLQTHLKRVHKLVLLDIKKLKNNQQVLGTLLQDGQGDNNAKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267730;
90% Identity: iTF_01267730;
80% Identity: -