Ppal004598.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- ARID5B
- Assembly
- GCA_014825455.1
- Location
- QVNV01018343.1:50023-53545[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-24 2.6e-20 72.8 0.0 1 89 71 157 71 157 0.95 2 2 2.7 8.6e+03 -2.5 0.1 6 33 504 532 500 534 0.79
Sequence Information
- Coding Sequence
- ATGTTCCAGTCACCGAAACTAAAAGGAAGACCGCGGAGGAAGCGTAAAAAGCGCAGCGCCTCGCCGGGTGAATCTTCTAACGAAAGCGAGGCGTCGGTGGCCTCGACGTCGAAGAGCACGCCTGCGACCACCAGCAGCAGCCTGGTGATACCCACGGTCGGCCGACCGCCCTCATCCGCGGTGCGGCGGAGCGAAAGAAAGACCAGCGCGGAAGAGAAGAAGTTTATCACGGACGTGCAGAGTTTTATGAACTCTAGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATTTGTTCCTGTTCTACACGAAGGTGCAAATGCTCGGCGGCTACGACACCGTCAGCGCTGGTCGTCTCTGGAAGACAATCTACGACGACATTGGCGGCAATACGGGTTCAACTAGCGCGGCGACTATTACGCGTAGACATTACGAAAAATTGTTATTACCCTACGAAAGGTATCAGCGAGGTGAGGAAGAAAAAGAGAAATTGAACAATGAACGACGTACCAAAACCACGAGCTTATCCGAGGATTCAGATGTCAAGGAGGAACCTAACGATCTATGTCCGTCGGAAACACCACCACCTGTGGAAGCAATTTCCGCGATCACGACGTCACCTCTGCAACCAATAACGTCGGCAGCGACGACGCCTTCGCTCTCGAATGAGAAACCAAAAACCGAAACCGGCAAAACGTCTTCGTTGCGTAGCGTGCGCGTGAAGCCGGAACGTTTGAAGTCCCTGAACACAATAATCGCCAACAGTGCGACACCTTCCAGCCAGCAAGCTAATCAACTGCCAAGTCCACCGCCATCCTCCAACACATCTCTTTCAACACCCAGTAGCACACCCTCCACGACACCCACGAGCGGCACCGGTAGTCAGAGCGTCCTCGAAAGACAACTCAACAGTCCGTTAATAACTCAACAAGTTCCACCATCGTGTTCGCCACCGGGCTTGCCCGTGACCAGCGTAGCGACGGTCGTTACTCTGACACCTCCACCCGAGAAAGACATGAAAGAAATTAAATTGGATCCTAAGCAGACGACCTTACTGGCGCAGGGCAAGGAAAACATCCCGTTGTTTGGCGGCGAGAAACCGCCTATCTACGCGGAGAAAACGATGATACCGCCGGTCTCCAGGTCGCCCGAGGTAATCGACCTCGAGAACGAGAGCGACAACACGACCCGAGACAAGATAATCATCCCCAGCTTCAAGAAACGTAAGCTCGAGATTCTGCGCGAAGGTGGTCTCGAAGTCACCGCTGTCGACTTGGAAATGCGACCTAGCGTGATTCAGAGCAGCGTCACACCGTCACCGCAGCCACCGGCCACGATGAGGAACGAGGAGAAGCAATCGCCGATCTCGCCGTATTCGCATCCCGTCACGCCTAATTCCGTTCCCAAATTGATATCCGTCACCGTGACGCCCGACATAGGACACATGTTGCCCTCGCCGCAAGAGCATCTGAATCATCAGCAGCGCGGTCCGATGATCAAACAGCTACCGGCTCATCATCACAACAACAACAACAACATTATGACTAATAATAACATGATGAACAGTCGGGTGATAAATCTCGGTAACTCGAATAACACCGCGTTGTTGCAGTTGTACGCGAACGCGAATGCCGCACCGCCAACTTCAGCGGCAATCCCCTCGGCCGCGCAACAACCGAACAGTCGTTTCGTTCCGCCAAACATTTTGAACGGCAGGTTGATGCCGCCCAAAGTAACGCAATCGAGATCGATATTTATGCACAACGAAAAGACGGTTTACGGGAATCCAAAAGAAATTCTCGGCTCCCCCAAGTATCGTTCGCCACATCCGCCTCAACAGCAGCAACAACAGCAGCGCTCGCAACTCCCGCAGATGAGTGGCGGCGAACCCGGGCAAGGTGGTGTTCTCGATTTGACGCAAAAGTCCAACGAGAAACCCACGTTCCCCAGACCTAGTCTGGAAATAGTCAAAGTACCTGTAGTGCCGAGGCCTAATCCGTTGAATCTTGAAATGCGGAATGCACCCACGGCCAAAGACAAATTGTCGGACCGACCTGTTGTCGACTGTCCGAAGCGAGCACCCTATATCCCCGCCTATCAGAATGTGATCGACACTCGGACCATCGCCTCGAACAATCTCGAGATCACGTTGGTGAATCCCGCGGGTAAGCAGAAGAACAATCATCATCTGGGCGCACCGCCACACGTTCAGATACCGAGTCCACCTAACAAAGGTAACGTGATGGGAACGTTGAATAGCGTGCCGAGGAGGCAACCGCAACTACACCCGCCATCTCAAATAAATGGAAAGTACACGGCGAGAAACGAACCCGTTTCCCCGTACACGCCAAGGAAGCCGACTCATCCTGTCATACCGAACGTACCTAATCTAAATCAGCTGAATCACACCTCGAGTTCATTCCCTAGAATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTCGTGCCGACAGTGCCGCAAGCCAATTCCACTCCTTATTCGTTGTCGCAACTGCCAAACGTGCCGGGCAAGTTTCTACCGCCGATTCTGGACCCCATGTACTATCCCACGTTTTACAACGGCTTGTTCCCGCCGCCGCTTCCGCCCACAGTCGCCGCCGCAGCGGCGTCACCGTTTCTGCCGCCCGAATTCGGCGCATATTACAAGGAACTACTTGCTTCCTCGCAACCAAGACTGACGGGGATGGCGGGGCAGTCGCCGCATCAACAGCCGGCCGCCCCAACGTCTAAGTAG
- Protein Sequence
- MFQSPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTPATTSSSLVIPTVGRPPSSAVRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDTVSAGRLWKTIYDDIGGNTGSTSAATITRRHYEKLLLPYERYQRGEEEKEKLNNERRTKTTSLSEDSDVKEEPNDLCPSETPPPVEAISAITTSPLQPITSAATTPSLSNEKPKTETGKTSSLRSVRVKPERLKSLNTIIANSATPSSQQANQLPSPPPSSNTSLSTPSSTPSTTPTSGTGSQSVLERQLNSPLITQQVPPSCSPPGLPVTSVATVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKPPIYAEKTMIPPVSRSPEVIDLENESDNTTRDKIIIPSFKKRKLEILREGGLEVTAVDLEMRPSVIQSSVTPSPQPPATMRNEEKQSPISPYSHPVTPNSVPKLISVTVTPDIGHMLPSPQEHLNHQQRGPMIKQLPAHHHNNNNNIMTNNNMMNSRVINLGNSNNTALLQLYANANAAPPTSAAIPSAAQQPNSRFVPPNILNGRLMPPKVTQSRSIFMHNEKTVYGNPKEILGSPKYRSPHPPQQQQQQQRSQLPQMSGGEPGQGGVLDLTQKSNEKPTFPRPSLEIVKVPVVPRPNPLNLEMRNAPTAKDKLSDRPVVDCPKRAPYIPAYQNVIDTRTIASNNLEITLVNPAGKQKNNHHLGAPPHVQIPSPPNKGNVMGTLNSVPRRQPQLHPPSQINGKYTARNEPVSPYTPRKPTHPVIPNVPNLNQLNHTSSSFPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVPTVPQANSTPYSLSQLPNVPGKFLPPILDPMYYPTFYNGLFPPPLPPTVAAAAASPFLPPEFGAYYKELLASSQPRLTGMAGQSPHQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268803; iTF_01269585;
- 90% Identity
- iTF_01268803;
- 80% Identity
- -