Pgra002143.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_002006095.1
- Location
- NW:160698-188403[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.1e+04 -6.4 13.9 69 103 117 151 80 194 0.45 2 3 1.1e-100 1.2e-96 322.1 9.2 1 218 743 955 743 955 0.91 3 3 0.033 3.5e+02 0.2 1.1 64 92 1180 1208 1162 1237 0.50
Sequence Information
- Coding Sequence
- ATGATTACGTACGTTGCTGATGACGAgtgcgagagagcgagacaaAAAGACGGGAGCGAGTTCAACaagATGGCACAATTGCCCGAGATGGAATCGCCTTCGGCCTGTCAGGAGTATCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGATCTCGCAAGcacgtcgtcgacgacgatgacgacaacaacgacgacgacgacaacaacaacgcCAGCAGAAGATGCCGCGCGTCAATCCGTCAATGAGGACTTGCGTGAGAATTCGGTGGTGGTGCACGAGAAGATAAACGAAAACTCGGAGAACGGAGAACTCGAGGAGAGACAATCCAGTGATAatctttatttagaaaaagaagagaagaaagaaaatgaaaaggaagaagagaagaaagaaaatgaaaaggaagaagagaaaaaagaagtggAAGATAAGATCAACGAAGACAAAGAAGATTCGATAGAGAAAGTTCTTCTGGAACCTAAGGAGTCGATAAAGACGGTCAGTCTTCAAACTCATGATCTTGACGACGAGGAAACCAGGCTTGAGGAACCAGTCTGCATTTCCAGGAAAAGATCAGTCGACAACGATTTTTTACCAATCGACGAGGATGTGAAGAAAGTTGGTCTTGAGATTTCGGAAGAGCAGGCAATACAGTTGAAAAACGACATCAGAAGACTGTCGCCGGTGCTTGTAagcacgcgagagagaacgttGGGTGAAATATCTTTGATTTCGGAATCGTGTTCCTTCAAGGACGACATCGATGGCAAAACAATGTCGAAGAGCGACGACGGTCACGACGAATCGTTGCGGGAGAACGAGATTCCGGTTACTAAGAACTGTGCGAAAAAAGATGTCGACGAAGCGAAACAGGAAGCGATTGCCAAGGTTACCGCGAGTTCTCCGACAGAGTGCACAAGTTGCGACGGTGCGCTCGAGATGATCAACTCGGatcgcgaagagagaaagatagttCGGTGCGACGGTCAAGCGAAGATTCTCGATGTTGATTCTTCAATGTCCTCGGAGCGCGACGGTTTCAAATCGACGGAATCGAATCAACATGACAACGTCAGTGACATCATGAGCGCGCCTGACGTTTCGATCGAAAAGTGCGTCGACGAAACGACGAGTGCTGTGGTCTCGGATCTCGTCTGTCGGCGTTTGTCGGTGGTGCTAAACCGCATCGACAACGTAAATGTGATAAAATCGAAAGACGATGCTGTTGAAAAAGATCCACTCTATtccgaaagaaaaagaaatctcgaaGAGGAATACAGCGCGCCAGGTAAAACTCCCTTGAAGAAACAACGGTGGCATAACGACTCCTCGCCGATGACCAGATCAAAAACAAGCGAGCTGATAGAACCTGTCCGTAGTCCAAATAATCTGATTTTAAAGAAGTGCAAAGTGGTGCTAGAACGAATCAACGACGACAAACAATCTCAACCGGCAAAACCCGATGAAACTGATATTACTTCGCAGAAACTCGAGAGAGAAGGATCCGCGCCGGTGTCCGTAATCGGACAATTGGAGGAAGACGAAGAGGTGGTGCTGGCGGGTTCTTCGCTTTCTGGCGAACGCGACCGAGTGTTTAACGAACTGGACTCGTCGGAGACGATGCCAAGTTCTCCGGAGGAGATGTCGGAACCGGCAATGGACATCGTTGAAGGTGTCGACACAGAAACGGAAACTGAGACCGGATCCGACAGTTCGGAGGTGTCACCTATCGTGAACATTCGGGAATTGCGCGATGTCGACATAGTGTCCGATCAGTTGCCGTGTCCAGAAGCGGAACCGCTTTGCTGCGTGGAAACGATGGCGCCGATTATGACAAGGCTGGAGACCGAGCGACCGGAAACCTACACCGAGGATTCCGCCGAGAGTTTGACTCTGACAACTGGCGCCAGAGACGACGTTAGATCCGATGGGAGCGATTCCGGTCTAGGTAATGAAATTCCTGGTGATCCTGGTCCCACACCGGCCCCTGAAAGCGATTCCGAAACCTCTTTTCTCGATAGACTGCCGGATGATATTCTCTCCGACAAAGAAAAAGgcaTGAACCAACTGGACAACTTTGCGACGTCGTCGGTTGCGCCCGGGATACCGGAACAGCCGCCCATGACGAGCTTTCGAACACTGCCGGCTAAGAGCAACCTAAAGCGCAGATTGATCGACTGCATGGAGAACGATGAGTCGCGGAGCAACACCGAAGAGCCTGTAAAGAAGAAGCGCAATATCCATTTCGACGCCGTAACCGTTTATTACTTTCCAAGGGCGCAGGGTTTTACCTGCGTACCTTCGCAGGGTGGCAGCACGCTCGGTATGAGCGCCACCCACACACACGCTGAGAGATTCTCATTATCGGAACACGCCGCTGAACAGAGGCGAATTCATCGAGCCCGCTTGGCGCAGCTGCGCTCCGAGCGCAACTGCGCGATCAACTGCGTGACCGAAACGGCGTCCAGCTCGGAAGATCCGAGCGACGACACCGACGAAGAGCCGAGCGATAACGAGGATCTTGACATCGATAGCTACTACTTTTTGCAGCCGGTGCCGACGTCGCAGCGTCGGGCGCTGCTTAGAGCGGCCGGCGTCAGAAGAATAGATGCCGTTGAGAAAGACGAATGTCGTGACATTCGGGCAAGCAGAGAGCATTGCGGATGTGGTTGTAAGGGATATTGCGATCCTGAAAGCTGTCCTTGCAGTCGAGCCAATGTCAAATGTCAGGTGGATCGACCTGGCTTTCCTTGCGGCTGCACGCGAGACGGTTGCGCGAATAGCTCTGGCAGAATCGAATTCAATCCTATACGAGTGCGAACGCATTTTATTCACACTCTTATGCGATTGGAATTGGAGAAGAAACAACGCGAGGAAGAGAGTGGCGGCGATCACGATCAGACGGACAATCAGGGCCAAAGCAACAGAAACGGCAATGGATCATTGAGGAATATTGGTTCTCTCGGCTCTGTGATGGACACTGCCGGTAACGGCGACGTGTGTGCAATTCCAGGACCTAGAAGCGGAAACGGAGGCGGGGGTGGATTTACGACTCTGCATTACGAGACGAGTCATGACGGTGTTACCGGCGGTATAGTGACGGCCGGTTGCCAGCCGGAAGTGCCCGGTACGCGAGAGGACAGTCTGGATTTGTACGCAATCAGTGACGATTGTTATCCGAGCGAAGACGCAGTAGACGGCAGCCAATCGATCGTACAGCGAAAGCTACATCCAGAGTTCAGCCAAGCCTTTCAGAGCTTCTCACCGGGTGGAGCACAAAGCGGCGGTGGCAATGGTAGCGGTATGAACTTCCAGCAGTCTTCGTATCAGGATTACGGCTCGCCGTATGCGGGTCTCCCGTCCACATCGCGAGTGCCGCAGTTTCAACAGCCGCAGTTTCAGCCCTCGGCGCCGCCCAATCCGGCCGCGTTTTCGCACTATGGACCGTACGGCGCGGCTCAAAACACTGCGAGCGCCGGTCTTCAGAGTAACTGCGCTGCCCAGGTACATCAGGTACCACCCCCGGgtcagcagcagcagcagcaacagcaacagcagcagcagcagcagcaacattCGTCTTACGAGACGGCGGTGTTTGCGCAAGATGACGCCGCGAGTACCGCGCAGTACACGAATTTAACCAATTCGGTGCAGCCGATGAACCCGAGCGTCGTGCAGCAGATGCAGAACAAGCTCGAGCCTTTCTCGGAACTGCTCAGCGGCAGATATTCGTACTACGGCGAGATGCACGAGCCGCAACAACACCACGGTACTTACGGTACTCACGGAACGACCTCGAAGATCGCGGAAATAGTCGAACCCGGCCAAGTTGCCGACGGGCAACAGTCCGAGAACACGTCAGAGGATTGCGACGAAAACTTCGGcgaaatcattaaaaaatccatGGTGGAGACCGTATCTGCCTAG
- Protein Sequence
- MITYVADDECERARQKDGSEFNKMAQLPEMESPSACQEYLVEAQEDSTSVDLASTSSTTMTTTTTTTTTTTPAEDAARQSVNEDLRENSVVVHEKINENSENGELEERQSSDNLYLEKEEKKENEKEEEKKENEKEEEKKEVEDKINEDKEDSIEKVLLEPKESIKTVSLQTHDLDDEETRLEEPVCISRKRSVDNDFLPIDEDVKKVGLEISEEQAIQLKNDIRRLSPVLVSTRERTLGEISLISESCSFKDDIDGKTMSKSDDGHDESLRENEIPVTKNCAKKDVDEAKQEAIAKVTASSPTECTSCDGALEMINSDREERKIVRCDGQAKILDVDSSMSSERDGFKSTESNQHDNVSDIMSAPDVSIEKCVDETTSAVVSDLVCRRLSVVLNRIDNVNVIKSKDDAVEKDPLYSERKRNLEEEYSAPGKTPLKKQRWHNDSSPMTRSKTSELIEPVRSPNNLILKKCKVVLERINDDKQSQPAKPDETDITSQKLEREGSAPVSVIGQLEEDEEVVLAGSSLSGERDRVFNELDSSETMPSSPEEMSEPAMDIVEGVDTETETETGSDSSEVSPIVNIRELRDVDIVSDQLPCPEAEPLCCVETMAPIMTRLETERPETYTEDSAESLTLTTGARDDVRSDGSDSGLGNEIPGDPGPTPAPESDSETSFLDRLPDDILSDKEKGMNQLDNFATSSVAPGIPEQPPMTSFRTLPAKSNLKRRLIDCMENDESRSNTEEPVKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERNCAINCVTETASSSEDPSDDTDEEPSDNEDLDIDSYYFLQPVPTSQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSSGRIEFNPIRVRTHFIHTLMRLELEKKQREEESGGDHDQTDNQGQSNRNGNGSLRNIGSLGSVMDTAGNGDVCAIPGPRSGNGGGGGFTTLHYETSHDGVTGGIVTAGCQPEVPGTREDSLDLYAISDDCYPSEDAVDGSQSIVQRKLHPEFSQAFQSFSPGGAQSGGGNGSGMNFQQSSYQDYGSPYAGLPSTSRVPQFQQPQFQPSAPPNPAAFSHYGPYGAAQNTASAGLQSNCAAQVHQVPPPGQQQQQQQQQQQQQQQHSSYETAVFAQDDAASTAQYTNLTNSVQPMNPSVVQQMQNKLEPFSELLSGRYSYYGEMHEPQQHHGTYGTHGTTSKIAEIVEPGQVADGQQSENTSEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268264;
- 90% Identity
- -
- 80% Identity
- -