Pgra003730.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- DNAJC1
- Assembly
- GCA_002006095.1
- Location
- NW:873699-876258[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-08 4.7e-05 22.7 0.0 2 38 296 335 295 341 0.88 2 2 6.2e-10 4.4e-07 29.2 0.2 3 45 378 425 376 426 0.91
Sequence Information
- Coding Sequence
- atgaatatatCATTGTTCCTTTTCGGAATTGTCTATTTTTTGAACGTGGTTGGATTTTCGTACGCGTGGGACGACGATGACTTGGAAGTGTTCGACGTGGTCGAAGAGGTCAATCAAAATTTCTACGATGTGTTGGGCGTTACACAGactGTGAACGCGTCGGAGATCAAGAAAGCTTTTAGACGATTGTCGTTGCAATTGCATCCGGATAAAAATCCCGCAGCGGATGCCGAACAACAATTTCGAAagTTAGTTGCCGtttatgatattttaaaagattccGGAAAGCGACAAAAGTACGACAATGTTCTTGTCAATGGTCTACCAAATTGGCGATCAGCTGTGTATTATTACCGTCACGCGCGTAAATTGGGATTACTTGAAATAAGCGGTCTTCTGTTTGTAGTAATCACGATAGGGCAATATATTGTGGCATGGGCGGCTTACTACGAGAAACGACAGACTTGTGTGCAAGTTTTAGGTAGCAAACTTCAAAAGTTGCAAAAGAAAAGTAAGAAGAGCAAAATGGATGTTCCAGATTTAGCTGatttcttggaaaaaattCCCACACCAACCATGTGGAACACTCTTCCATTTCAGTTACCAAGATGGATAATAGGTTCGATAATAGCTATACCGTCTACTGTGCGATTTATCGCGCAGGtcttgaaagaaagaaaggagagaataagacaggaggaagaagaggcgttGGCGCAAGAAAATGAGCAACCTGAACCTGAGGTAACTTCACGCGGACTCAGGAAACGCAGGTCCGGCTTCACACCGCAAGAAAGAAATAGCAGTGGCAATTTCAAAGaaactacaaaaaaagaagactgCGATTACACAAATCACGTCCACGAAAAGCAAGCGGTATCTGGCGGATTGTGGACTGATAACGACATATTAGAATTAATAAAGTATGTAAAGAAGTATCCCGGCGGGACTCCAGAACGATGGGAGAAAATCGCGAGCGTTATGAATCGCACTGTTGCAGAAGTTACGCACATGGCCAAAAAGATAAAAGACGAAGGCTTAAAGCCTGGTGAACCAATAGAGGAAGTTGGTGCGGAAGACAAGCCAAAGAAGATTAAGACTCGCGGTGAGGTCAATACAGTCAACGGTAGTGACTGGAGTCAAGAACAACAAAGGGCGTTAGAAGCAGCCCTCACTAAATATCCTAAAGGTGCATCGATAGACAGGTGggagaaaatcgcaaattgcgTCGAGGGCAAGACGAAggAGGAATGCCAAATGCGTTACAGACAATTGGTGGAATTAGTAAAAAAGAAGCAACAAACACAGTAG
- Protein Sequence
- MNISLFLFGIVYFLNVVGFSYAWDDDDLEVFDVVEEVNQNFYDVLGVTQTVNASEIKKAFRRLSLQLHPDKNPAADAEQQFRKLVAVYDILKDSGKRQKYDNVLVNGLPNWRSAVYYYRHARKLGLLEISGLLFVVITIGQYIVAWAAYYEKRQTCVQVLGSKLQKLQKKSKKSKMDVPDLADFLEKIPTPTMWNTLPFQLPRWIIGSIIAIPSTVRFIAQVLKERKERIRQEEEEALAQENEQPEPEVTSRGLRKRRSGFTPQERNSSGNFKETTKKEDCDYTNHVHEKQAVSGGLWTDNDILELIKYVKKYPGGTPERWEKIASVMNRTVAEVTHMAKKIKDEGLKPGEPIEEVGAEDKPKKIKTRGEVNTVNGSDWSQEQQRALEAALTKYPKGASIDRWEKIANCVEGKTKEECQMRYRQLVELVKKKQQTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264199;
- 90% Identity
- iTF_01269731; iTF_01267496; iTF_01268969; iTF_01271145; iTF_01268205; iTF_01266816;
- 80% Identity
- -