Pgra008686.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- NCOR1
- Assembly
- GCA_002006095.1
- Location
- NW:136549-169299[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-07 0.00037 19.9 0.0 3 43 422 462 421 465 0.96 2 2 1e-15 7.4e-13 47.7 0.5 3 45 871 913 869 914 0.95
Sequence Information
- Coding Sequence
- ATGGGTACCGGCAGCAGAGGCGATCGGCCAAGGATATCTCTCCTGCCGTCCGTCGGGTCCTCGGTAACGCCGATACCGTCGCCGACTGCTGCTGCGTCGGATTATCAGCAGCATGCGGTGGCGGCAGCGAGGAATCCGTCGCGAGTGGGCCTTATGCCTGTCCAACCGGATCAGTATTGCAGTCGTACCGCCGTCGATATGGCCACTTTGCAGCAGGAAGCGCCGCCCTTCAAAAAGATTCGCTTGGGTCAGCCTCATCAACAGGGGCAGCTGCAGTCGCAACCGCAATCTCGCTGTCAAAGCTTGTCGCCCGCGGATCACTGCGGTAACAAACAGGAACAACAGCAACATGTCGTGCAACTACAACAGCCGCTTAGGATAGACACTAGGGAGCAGCCTCCCGTGGGTGCGTACACTCCGCAAACAGAAGCCATCTCACCAACGCTTCCGGAACCGAATCCGCAGGAAGATGCGCAGTTTAGGAGTACCAAGGACGATTTGCTGCAACAAATCGGCAAGGTAGATCGAGAAATCGCCAAGAGGGAGAGTCAGTTGAATAATTTGCGAAAAAGGTTAAAAGAACTGGAGGAAACAGCGAACAAGCCTTTGGAAGCGAGCGGTCTCAAACGAAATATCGAAGAACAATCGCAACCGAAGCATCAATCGTTGGCGCAGAAGATTTACGCTGAAAATAGgCGAAGGGCAGAAGATGCTCATAAACTTTTGGAAAGACTGGGCCCCAAAGTAGAACTACCTTTGTATAATCAACCATCGGATACGAATGTATATCAGGATAATCGCACGCGACACCAGACCTGCATACGAGCTAAGCTTATATTGAAACTTCGAAGGGAACATGCCGAACGTGCTGCCCTTCATTCGCAACAGTCGCAAacgtacgccattttggttcagGAATGGCATCGCAAGGTGGAACGTTTGGAGGCGACGCAGAAAAGGAAATCGAAGGAGACGAAGAATCGCGAGTTCTTCGAAAAGGTGTTCCCCGAGTTGCGAAAACAGAGGGAGGACAAGGAGCGTTTCAATAGAGTTGGTGCTCGTATCAAGAGCGAAGCCGATCTTGAGGAGATAATGGACGGCTTACAAGAACAAGAGATGGAAGATAAGAAGATGCGTTCATACGCAGTCATACCGCCTCTGTTGTTGGACGCGAGGCAGCGGAGGATCGCGTTCCAAAATCGAAACGGTTTGCTTCAACCGGAGGAATTGGAGGCGCTGCACAGGGAACGTAAATTGATAAACGTGTGGAGCTCCGTGGAGCACGAATtgttcaaagaaaaatatcttcaGCATCCTAAAAACTACGGAGTGATAGCTCAATCGATAGAACATAAGTCCGTTCCAGATTGTGTACATCACTACTACCTCACCAAGAAAgcagaaaattataaacagCTTCTACGAAAATCACGTCAACGTACACGTAGCTCTCGAAATAATccaaataataaaGTAAATAATACTAGCTCGGCTATTGGACCTATAGATATTTTAACGACAGGAGTAACAACACGATTGCAGCGAGAACAACAACAGAAAACTCAGGAGAATCCTCAGAATACGGCGTCGACCGCGTCTACATCAACAACGAGCACCACCGTGACATCGAGCGCATCGTCGACGAGCATTTCTTCAGTAGTATCGACGACGACAACACCTGTGAGCTCGATATCGTCTGGCGTTAATGTAACGGCGGATTCCATAACAGCAtcaacgacaacgacaacgacaacgacatCTGTTCTGAACACTACTTCGACGAGTGTCTCGGCGACACCTACGACGTCCAGCGCGAAGGATTCCAAAGAGACAAGCAAAGAGATCAAGGAGAACAAGGATTCGAAGGAATCTCATCTCACGAAAATAGATACGAAAGAGGAATCGCAATCGGAGACGTCGTCGGGAAAGGACGTCAAAGTAATAATGGAAGGAAAAGGTGCGTCATCGTCGTCCTCGTCCGCGGTGAATGTTAACGCGACGAACGTCTCGACAATCCAATCGGACTTCAAGGAATCCAGCAAGAAGAAACCCGGTAGCAGGGACACGGGGAGTGGTGCTAACGTGGCAGCTAGCGGCAGGataaaagacaagaaaaaggaGAATCACATACCTATGGAAACCAGCGACGAGGAGGCGCCTACGATCGACGTAATCgaGAGTGGCAGACAGATAGGACCTCACGCTTGCATTGTATGTCAAAACGTCGTTGATGGAAGCGCGCACAGTCGCGCGTTACCGCGCAGCCAGGCGTCGCAGTACGGATTACGGGAGGATCAGGTGCCTCCTGGCGCACGTGTTTGCAATACGTGTAGGTGCAAGGCCGTAAGAGGACGTTACACAGCCTGTCCATTGCCCGGCTGTCCAAATCTGAGCAGCTCGAAGTCCAGAGTGAAACGGCTCAGAGCCTTGCCCGCCAAATGGCAGGACCTGCCGCCGGAAATCCGCGAACCGATAGCTCAGGAATTCCAGATACCAAATAGCGCGACAAAATGCTGCTCGGCTTGCTTTAGCCGTATATCGCGTCGTTTGGCACCTCATCTCACCGGTAGCACCGAAGTGTCTGAGGACGGCGCCGACGCGTTGTCCCGACAATGGACGGACGAGGAATTGGAACAGCTTCGAAGAGCGCTTCGCGAACACGGCACCAATTGGCCGAAAGTCGCCGAGCAGATACCCGGCAAGACGAATCATCAGTGCAAGAATTATTATCTCGCTTATCGAAAGAAGCTCAGCCTGGATCAAGTTGTGGCCGAGTATTACGCATCGTTGGGCGAAGAACGAAGACCGTGTCTAACGGACGAGGAGGAAAGCGGCAGCAGTACCAGCAGCTGCGACGAACTTGTCGTACACGATTCGAGTGATACCGCTAGCGCAGGCAGTCCTGCGGCCATGACCGGTAACAATCAAGGAGTAACATCTCACGAACCCACAACAGCGTCGACGTCACTACCGATGTCTTTCCAACGATCCACGGAACAGAAAATCGGTGAAAAACTCTCGGACATAGCGGTAGTGTCGCTTGTACCACCTGGCACTTCTCACCAGTCTTCAAGCACAACTGTCGCTGCATCTAGTGGTGGCACCAGGGAAGATTATGATAGTTCTGCCACGACAGCGGACGAAGGTCAGGGAGGTGCTGATTTAGATAATGGCGGTGTTGTAGTCACTCTGACGTCCGCCAATAACAACACGCCGTCattacaacaacaaaatcAGCGACACAAACATGAGCATCCGTCGGTCGTTCATTCGCCACCAAATAACGATCCTATTACTGTCAAAGATCTTATGGTTGGTGTAATAGAAATGCAATTAAAACGTAATTTTAACAGTCCATCCGATAGCGGATCATCAGCGCCTAATAGCTCCGCTACACCGACAATATCCAGTATTTTGAAGACGGATCATCGTAATGACATAGCATACGTTCGCAGCTACAAAGCTAGCTCGAACATATCGAATAATACTCCGTTATCGTCCAATAGAGACTCACTCGCAACGCTTTCTGTTGTTTCGGGACCTCATCACAGTCATCGTTCTGCCCCAAGTCCACAACAGATCGGGCAAATGCAAGCCACCATTACACCCTGTCCGCCTGCACCACCCAGTAGTCAAGCCTCGTCATCGGATTTACTCCCTAAGGAAGGTCTGGTTGTTATGCAAGTACAACAGGCTCTTCGGGAAACGGAGGGTACGTTGGATTTAAGCATCAAGAAACCTCGAGTGCAACAAGAATATAATCACTCGATGCAAATGCACAAACCACCGCCTACGGTCACGTTGTATCGATCAGAACCACCTCCGAGTGCGTACTATCATTCTCATGCGCCTCACCCTGAACAAGGACGCGGCGCGAAGAGTCCTCTGGTCTACTCTTCATCACCGCGACCGCAGGCTCCCATCACACCGAAGATGAATAAAGTTAACGTACCACCGCCTCACCCGAAATTGTCGCCAAAATTGAGCAGCATGGGTACACCGGGACACAAGGGTGGTTCTATCACGCATGGTACGCCAATGCGTTATAACGATCTATTACAGAGTTTATTGAAGCCTGAACCTCCGGCGGGTGGTGGTAACGCCAACATTGCTGAACGTGGTAGCAGTGGCGGTGCTGTCAATACTTCCGCCGGTCCAGGGGCTCCAAAAGAAACTGGAGGATCAATTACTCAAGGTACACCGGTAATGCCATTTGCAATGGATAAACGCGGCGCGCCGATGTATGACTATCATCGCCCCATTCGACACTCGCCTGTCACGGGCGGCAGCAACGTTCCACCTCCGGGACAAGTTCCCGTTAGTAGTCAAGTGGCGTCGCCGGCCGTCGTGGTAAGCCACGGTGGTAGTCAGTATAATTCTTACTCAGCCGCCGCGTGTCCACCGCCTAGTTACACAATGGAACAGCAATTGTCAAGTCGGCAAATCATTATGAACGACTATATTACTAGCCAACAAATGCACGCACGCGCCCGGAGTAGTGGTGGTGGCGCGTCTGCTGCCAACGAGACGGTTAAGAGCGAACCGCCGCCACCACCATCTTCAACTCTCTATTACGCTAGCACGCCTCCTCCACCGCAGACGCATACGCAGCCACGACAAGGCGTCATTCAGAGGCATAATCCGCAAAAGCAGATGCACTATCCGCCTCCGCCACCGGGTTTGGAGGCATTCTCTAGTCTGGTGGATGTGGCAGTGCAGCAACCAAGTCTTCCGGTGCCGCATCCGCATGGTCATCCAGCCGCGACTGGCAGTAGTGGACACGAAGGTCTTGGAAAAACTATGGCCGATCGTTTGATGGCCGACCGTTTTGATAACAACCGGGCATTTCGGGAGCAAGACATACGGATACAACAAGATCGTCACATGACAATGCAGGCCGAACACAGACTGGCGATGGCAGCTGCAGCGGCGCACCATCAGCGCGATCAACGTGACAGGGAACTCGTTCatttgcgagagaaagaagcgcATCGTGAAAAGGAACAACAGCACCTGCACCAGTTGGAACATCGTCTTGCAAACATCCAGCGGGAGAAAGATATTCAGCAGCAGGAACATCGTCTTGCGCAGCAGCGAAAGGACATGCACGAGCACAAGGATATGCACGCTCGTTTACAACAAGCTCGAGAAAAGGAGATCCAGCACGATCGATTTATTCATCAgcagcgagagaaagaaattcatCAACAAATGgcggcggcagcagcagcGCAACGCGAGAGGGAGCACGAACAGCATCGtctgcagcagcagcagcaacgcGAGAAGGACATGCAGCAAGATAGATTCCTTCAGGAGAAATTTATTCAGcgtgaaaaagaaattcaacAAGCGGAACATCGTCTGGCTGTGCAGCAAGCGCATCGCGACCATCGGGAGCTCGCGCATCTACAGCAACAACAACGTATGGAAGCTGATAGGAGGCAACAAATGCACCTCTCCATGATGTGTCACAGAGatcagcaacagcaacaagaCAGAGAGTCGTCGAGATTATTGAGTAGCGGATTCTCACAGTCGTCTCGACTGCAGTCTCAGCAAtcgcagcagcaacaacagtcGTCATCGCGACAAAATCAATCCAATCAACAACAAAATGACTCGTCGACTCTCACCGCTGCTACTATTATAGATGCAATTATTACACATCAGATCAATCAAGGATCAAATGAGAACTCCGGTGGAAGCGGTTCTTCAGCGAATCAGCCGACACGTGCTGGCGATCGTCTTTTTCAGGGCTTTCATCGCGAAACGCAGCAAGAGCCAAACGGTATAGCTCACAGTCCCGCTGGCGAAGGAAGTGGCAGCGGTAACGCTGCAAGTGGCAATGGTAGCGGCGGTAGCAAAACAGCAATGACCGTCGGCGAACACGTCGATCGTATTGTATCTAAGGATTATGCCACACATCAGTCATCGTATCTCAGATCTTATACGACATATCAAATTGAGGAATCGTCGTGGAAGAGACGTAAACTTAACGAGTCTGACCCAGTGAAGAGCGGAGACGAGATGATGCGAGCTTTCACTCGGCAACAGTTCGAACAGacgcagcaacagcagcaacaacaacaccAGTCCTCCGGAAAGCAACAGCATCACTCGGTCGAACCGGTTTCGCCGCCGGAAGCGACTACCAATCATTACGGACGTCACTTCTACGAATCGAGCACTGCCACATCTAGTTCCGGAACTCCTTCCAACAAGCCGCATCAGATATCACCGTTCGATTACGTGAAGAATAAGATCGTCGAAGTGATGCGCACCGAAGATGATAAGGCCGCCGGTGGTGGCGATGTTGGCTCAGACAGAAACGGAAGCGGCAGCTCTATTGTTACAACCGAGAAGGATGAGAAAGGGGCAGGTGCGGGAAACGTAGAGAGAAGCCCGTCCGGTAGCGGTGGTGGTAGCGGGAGTGGCAGTACCGGCGAGATGGTGGTTGATGACACAGGCAATCCGACTCGTGAGCAGCCACCACCCCCGCCTACGCCCGCGGCTACCACCACATTTTATCCGTTTAGTGCGCTAGGAGTGCACACGGGTCCACCTCCAGCCCCGCCACCCGCCGCGACCACATCCACCTCGGTGAAGTCGGAACAGATGCAGGCCGAGCCAGCGCCTTTACTATCCGCGCAATACGAACCGCTCTCGGATGAGGATTGA
- Protein Sequence
- MGTGSRGDRPRISLLPSVGSSVTPIPSPTAAASDYQQHAVAAARNPSRVGLMPVQPDQYCSRTAVDMATLQQEAPPFKKIRLGQPHQQGQLQSQPQSRCQSLSPADHCGNKQEQQQHVVQLQQPLRIDTREQPPVGAYTPQTEAISPTLPEPNPQEDAQFRSTKDDLLQQIGKVDREIAKRESQLNNLRKRLKELEETANKPLEASGLKRNIEEQSQPKHQSLAQKIYAENRRRAEDAHKLLERLGPKVELPLYNQPSDTNVYQDNRTRHQTCIRAKLILKLRREHAERAALHSQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDARQRRIAFQNRNGLLQPEELEALHRERKLINVWSSVEHELFKEKYLQHPKNYGVIAQSIEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSAIGPIDILTTGVTTRLQREQQQKTQENPQNTASTASTSTTSTTVTSSASSTSISSVVSTTTTPVSSISSGVNVTADSITASTTTTTTTTSVLNTTSTSVSATPTTSSAKDSKETSKEIKENKDSKESHLTKIDTKEESQSETSSGKDVKVIMEGKGASSSSSSAVNVNATNVSTIQSDFKESSKKKPGSRDTGSGANVAASGRIKDKKKENHIPMETSDEEAPTIDVIESGRQIGPHACIVCQNVVDGSAHSRALPRSQASQYGLREDQVPPGARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPAKWQDLPPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLTGSTEVSEDGADALSRQWTDEELEQLRRALREHGTNWPKVAEQIPGKTNHQCKNYYLAYRKKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELVVHDSSDTASAGSPAAMTGNNQGVTSHEPTTASTSLPMSFQRSTEQKIGEKLSDIAVVSLVPPGTSHQSSSTTVAASSGGTREDYDSSATTADEGQGGADLDNGGVVVTLTSANNNTPSLQQQNQRHKHEHPSVVHSPPNNDPITVKDLMVGVIEMQLKRNFNSPSDSGSSAPNSSATPTISSILKTDHRNDIAYVRSYKASSNISNNTPLSSNRDSLATLSVVSGPHHSHRSAPSPQQIGQMQATITPCPPAPPSSQASSSDLLPKEGLVVMQVQQALRETEGTLDLSIKKPRVQQEYNHSMQMHKPPPTVTLYRSEPPPSAYYHSHAPHPEQGRGAKSPLVYSSSPRPQAPITPKMNKVNVPPPHPKLSPKLSSMGTPGHKGGSITHGTPMRYNDLLQSLLKPEPPAGGGNANIAERGSSGGAVNTSAGPGAPKETGGSITQGTPVMPFAMDKRGAPMYDYHRPIRHSPVTGGSNVPPPGQVPVSSQVASPAVVVSHGGSQYNSYSAAACPPPSYTMEQQLSSRQIIMNDYITSQQMHARARSSGGGASAANETVKSEPPPPPSSTLYYASTPPPPQTHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPAATGSSGHEGLGKTMADRLMADRFDNNRAFREQDIRIQQDRHMTMQAEHRLAMAAAAAHHQRDQRDRELVHLREKEAHREKEQQHLHQLEHRLANIQREKDIQQQEHRLAQQRKDMHEHKDMHARLQQAREKEIQHDRFIHQQREKEIHQQMAAAAAAQREREHEQHRLQQQQQREKDMQQDRFLQEKFIQREKEIQQAEHRLAVQQAHRDHRELAHLQQQQRMEADRRQQMHLSMMCHRDQQQQQDRESSRLLSSGFSQSSRLQSQQSQQQQQSSSRQNQSNQQQNDSSTLTAATIIDAIITHQINQGSNENSGGSGSSANQPTRAGDRLFQGFHRETQQEPNGIAHSPAGEGSGSGNAASGNGSGGSKTAMTVGEHVDRIVSKDYATHQSSYLRSYTTYQIEESSWKRRKLNESDPVKSGDEMMRAFTRQQFEQTQQQQQQQHQSSGKQQHHSVEPVSPPEATTNHYGRHFYESSTATSSSGTPSNKPHQISPFDYVKNKIVEVMRTEDDKAAGGGDVGSDRNGSGSSIVTTEKDEKGAGAGNVERSPSGSGGGSGSGSTGEMVVDDTGNPTREQPPPPPTPAATTTFYPFSALGVHTGPPPAPPPAATTSTSVKSEQMQAEPAPLLSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -