Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: SNAPC4
Assembly: GCA_002006095.1
Location: NW:445805-450259[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.089 64 3.1 0.0 3 17 218 232 216 234 0.90

2 6 0.034 24 4.4 0.0 13 46 272 310 269 310 0.76

3 6 1.7e-09 1.3e-06 27.7 0.3 3 45 318 362 316 363 0.94

4 6 7.3e-07 0.00052 19.4 0.2 4 43 371 414 370 417 0.97

5 6 6.3e-12 4.5e-09 35.6 0.0 1 45 423 468 423 469 0.92

6 6 1.6e-13 1.1e-10 40.7 0.0 3 45 477 519 475 520 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.089	64	3.1	0.0	3	17	218	232	216	234	0.90
2	6	0.034	24	4.4	0.0	13	46	272	310	269	310	0.76
3	6	1.7e-09	1.3e-06	27.7	0.3	3	45	318	362	316	363	0.94
4	6	7.3e-07	0.00052	19.4	0.2	4	43	371	414	370	417	0.97
5	6	6.3e-12	4.5e-09	35.6	0.0	1	45	423	468	423	469	0.92
6	6	1.6e-13	1.1e-10	40.7	0.0	3	45	477	519	475	520	0.95

Sequence Information

Coding Sequence: ATGTCTGTCTGCACATTACCCGCGTTGTGCAAAATCCACCATTTTGCTGGTTCCCCGAAGAAAGGAGCCTCTGACCAGTCTAGCCACGCGCAGACACGCGTCGACTTTCTGTTCTGCTGCGCGTACATACGTAAAGAAGAAGCCTTCACCATGAGTGATTCAGAAGACTCTGATATTCTGGCTGACATCAAGGCATTGGATGAAGCTTTGAGTTTAAAGACACAGAATGCAACACAACGTGCTAATAGTTCTTTGCGATCTAACAGTCTCTCTTCAATAAGATCAACCGATTCCGAGAGCAGTGACGATGAATGTTTTGATTATCTGAGTACAGTTCAGTGTACTGATACAAACACTCTGAACGCTTATGAGATTAATATAAAGCTGACTGTAGGTCTCAAGTTGGTTCAAAAGAAGTTACTTAATCTGTTGGACAAATGTGAGAAGAAGATAAAACAATTAGATGACAAAATAGCTAATGGCAGCGCAGGTACCAATGTTGATTGCAGTTTATACTCTAAACTAGCTATGACCAATGCTGGTATGCCATATTTCAAGGATAaggatttattttattgcccTAAAAACTATGACACAAAACAGAAAGAATCTCGAGGCGAATTGTCTGTTCTGTCTTTGAGCAAACCAAGTCGTTGGTCAGCAAAAGACAAAGAGACTCTTCTGAAAGCTATACAAAATGAAGCCAGTGAAGCAATATTAGCAAACAAGTTTAATCAAGACACTGGAAAAATCAGGAAGAAAACATCGGATGATCAACCCAACGAATCAACATTTGTGCTTCCAATGAATTTCAAACAAATGGTAGGACCactgggagagagagagttcgatTGGTACAAAATTTCTGTCATGCATTTCGAAAATAAGCATTCACCAGTCGAATGTCGAGCTATGTGGAATGTCTATTTGCATCCAGACATCAGAAAAAGTGGATGGACCAATCGAGAGAATAATTTATTGCTACAGTGTGCCAGGAATAATAACTATCAAGATTGGGATACTATTGCTAAGAACTTGAATTCAAATCGTAGTGCTTATCAATGTTTTGTCAGATATAATACCATTAAGAAAGTTCCAACCGGAAGTTTTTGGAGCAAGACGGAAGATAGACATCTCTCACACATCATAGATACTCTTAAAACAGGTGATTACATTCCCTGGTCTGAAGTCGCGTTTTATCTTCCACACAGAACTAAACAACAGATTTACACGCGATGGATATACAGAAAATTGCCGCATTTGAAAAAGGGCAGGTTTACTTATTCAGAAACCGATACTCTTTTAAAAGCAGTAAAAATCTATGGCACTGACTTTGCCAAAATTTCGAATAAAGTGATGCCTAATCGATGTTCTTCGCAACTTATCGATCATTACAATAGGGTAATGGAAAGATTGGTAGGCAATAACACATGGACGTTCGATGACGACGTGAAATTGATTCATTTGCGTCAAACGTTGGGTAATACTTGGGTCAAAATAGCCGAGTATTTTCCTGGAAAATCAAGAACGCAAGTGAGACATCGATACTCCTCACTATTAAGATATACAAGGCGAGATATCAGTCTTGAGAATATACCTAGAGCACGTGGAAAAACTAAGACTACAAGAAAAACGAGTAAAGATACACCTTCGTCCGTGAAACAGAATGTCTTTGGTGTGGGTTTCGAGTCTGATTTTGGGGACATTAACGATATTCATCTAAGACTGTACGAAAACCTTTCTTTCCCGCCTTCGAAGGAACCTTTTACGGTACAAGAAGAATGCTATGATTTCGAAAAACTTGTACGCGACACCAAAAGGTCATACAATGTGTTACACATGTTAGACGCTCGTCTTTATCTCCCGGGAGGTGATTTTTTGGATTAcgtgcatttaaataaaagagacaaacaactttttatttctctgatagaatatattaatagcGCAGGAGACAATCACAAGCAGAAAAACGCGTTGGTGGAACAATGCAGAACGCGAATGTTCGGTAGTGTTTCAAAAGTTAGTGAAGAATCTCATTTCATACCGCCACTCCCATTTAACGGTCATATGAGGATAGGCAAATCAAAAAAATCAAGTATCACAGATACAATAGACTGCGATTTAAATTGCGAGGAAAAGTATCTCATTGATGTGCCTGAATATTTCTTCGTGTCTTCTCATACACTTCCTGTTGTCAGTTGGGAAGAAGAAATTGAGTTCGACAGACTTAGtgaatatttgataaaacaaacttttaacGGAACTTTGAACGAAAAAACGACAAATCTGTTGAGATCGTTGCCGtgtactttgttttttgctaagaaagaaagagagaccgcAGACGATTTAGAGATTACAAACAAACGTAAAAACTTACAGTACTTGTATGATTCGCGCAATTTTGATTACTTTGATGAAGCGGAAGAAGcaaatatgtttaataatttgGTTCTTCCAAATCAGGCGACCTTGTTAGGTTGCAAAAATTTACTTCTATGGAAATTGTTATACGAATATCAAAATCACGACGTTGTTGCGTCTCTAGAAAATGAGGAATTAGAAACAGAAAGTGTTGACTATCAACTTCTGCGAATGCGCCTGGTACGATTGTTTAAAATACCAGTAGGTTTGTCAAACATTAAATTGCGAATTACTGACTTGGATCTAAACGTATTTCATGAACAAAAATACGCTTCGATCCAGGAAGAtccaaatattacaaaaaaaagaaaatctctaGAAAATGAGAATCTTTCTATATGTTTGCATAAAAAACGTAAGTGTAATAACGTTTTCAATGATGAAGTAGCTTAA
Protein Sequence: MSVCTLPALCKIHHFAGSPKKGASDQSSHAQTRVDFLFCCAYIRKEEAFTMSDSEDSDILADIKALDEALSLKTQNATQRANSSLRSNSLSSIRSTDSESSDDECFDYLSTVQCTDTNTLNAYEINIKLTVGLKLVQKKLLNLLDKCEKKIKQLDDKIANGSAGTNVDCSLYSKLAMTNAGMPYFKDKDLFYCPKNYDTKQKESRGELSVLSLSKPSRWSAKDKETLLKAIQNEASEAILANKFNQDTGKIRKKTSDDQPNESTFVLPMNFKQMVGPLGEREFDWYKISVMHFENKHSPVECRAMWNVYLHPDIRKSGWTNRENNLLLQCARNNNYQDWDTIAKNLNSNRSAYQCFVRYNTIKKVPTGSFWSKTEDRHLSHIIDTLKTGDYIPWSEVAFYLPHRTKQQIYTRWIYRKLPHLKKGRFTYSETDTLLKAVKIYGTDFAKISNKVMPNRCSSQLIDHYNRVMERLVGNNTWTFDDDVKLIHLRQTLGNTWVKIAEYFPGKSRTQVRHRYSSLLRYTRRDISLENIPRARGKTKTTRKTSKDTPSSVKQNVFGVGFESDFGDINDIHLRLYENLSFPPSKEPFTVQEECYDFEKLVRDTKRSYNVLHMLDARLYLPGGDFLDYVHLNKRDKQLFISLIEYINSAGDNHKQKNALVEQCRTRMFGSVSKVSEESHFIPPLPFNGHMRIGKSKKSSITDTIDCDLNCEEKYLIDVPEYFFVSSHTLPVVSWEEEIEFDRLSEYLIKQTFNGTLNEKTTNLLRSLPCTLFFAKKERETADDLEITNKRKNLQYLYDSRNFDYFDEAEEANMFNNLVLPNQATLLGCKNLLLWKLLYEYQNHDVVASLENEELETESVDYQLLRMRLVRLFKIPVGLSNIKLRITDLDLNVFHEQKYASIQEDPNITKKRKSLENENLSICLHKKRKCNNVFNDEVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267492;
90% Identity: -
80% Identity: -