Pgra002177.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- Myb
- Assembly
- GCA_002006095.1
- Location
- NW:41925-66687[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9 5e+03 -3.0 0.2 32 45 61 74 58 75 0.79 2 4 3.8e-16 2.8e-13 49.1 0.1 1 45 92 141 92 142 0.92 3 4 6.6e-22 4.8e-19 67.5 2.5 1 46 148 194 148 194 0.98 4 4 8.5e-21 6.1e-18 64.0 0.3 1 44 200 243 200 245 0.96
Sequence Information
- Coding Sequence
- ATGGATATAGTATCGAACACATTGGATATTTTCACGGGGACCAATAGATTGCCGATCAGCAATGCGGAAGTCACGAGTTATCAGTCGTCCTTTTACTCACCACCGGCCACCGAGGCGTCTCAATCGTGTTACGATTCTAGTAGCGGTGGAGAATCCGATAGCGAATATTTTAGCCGATGCAATAAAGAACAAAGTCAAGTGCAAAATCGAGCGCAAAATCAAGTGCAAGATCAAATACCCTCTACCGCGTCTAATCAAGGAAAACACATAAACAAAGGAAGATGGACCAAAGAAGAAGACGCTTTGTTGAAGCAATTAGTAAGCACCGCGGAGCAGCTCGGTACCGGTCCACGATGGGATGTTATAGCCAGTCATTTTCCAGATCGAAGCGATGTTCAGTGCCAGCAGAGATGGGCGAAGGTCGTGAACCCGGAGTTAGTCAAAGGCCCATGGACAAAGGAGGAAGATGAAAAAGTGGTTGAACTTGTGGAGAGATACGGCCCGAAAAAATGGACTTTAATCGCGCGACATCTTAAGGGTCGTATCGGTAAACAGTGCCGAGAGCGATGGCACAATCACTTGAATCCAGAAATAAAGAAGACCGCGTGGACAGAGGCGGAAGATAAAATAATCGTCGAGGCTCATCGTAGGGTTGGCAATCAATGGGCAAAAATTGCTAAACTTTTACCGGGCAGGACTGacaatgcaataaaaaatcattgGAATAGCACGATGAGAAGGAAGTACGAAGGTGAGGAAGGAAGAGTTGTGGTCAAAGGTAGAGGTAAGAAGAGAAACGCGGAAAGTGCTTCTCTTCTTCTGGAAGACAGTCAGAGTCAGCCGAAACCCGCCTTGACTAGCTCGACGGAGGTCAGCACCTCGCAAACCTTCGACATAAATCAGGTTGATTGGGTCAGAGCTTGGGAACATCAGCAGACTTCAACAAATTATCAGAACGCTCAGATAAATAAGCAGCGTACTCATGGCGGTGAAAAACGTGTGCAATCTCCGTCAAAAAGAGGATTGTCTCGAACGAAAACCGAGACAATTTCGTTTCCTAAATATTACAATCTGCAGCAAATGCAGAACGAAACTGTCGGTTCGAAAAGCTCGGAAATCAAATTGATGCCGATGCCCGATTTAGAGGAAATGTCCGAGGATCAGTTGGAGAAGGAAAAGAGCAGCCCGCCTCCTATATTACGAAGACGTAAAACCATGTATTTGCACAGGACAAACATCTCCAACGATAGCGGGAATCATTCGGATTACCTCATAATCGGTCAGCACTCGCAAACGGAAAATATCACTCCCTCAACTCCCATTAAGCAACTTCCGTTCAGCCCGTCGcagtttttcaataatttgagTCCGGAAACGTCCTGGGTGCATGCGAGTACTCCCAAAGCAAGTAGTCCGGGTCCGCTCACGACTCCGCAACCTACCGGGTTTCGACGAAATCAACACGACGGTAATTCGCCAAGAACGCCAACGCCCTTTAAAAACGCTCTTGCTGAGTTTGAGCGGCGGAGTGGCGCCGCTCAATTACCCGCAACGCCTAGTCGTTTGGACGCGTTGAACGAGATAATCAAGCAAGAGACCGATCGTGAAAGTCTTGCCGGTACAAGCTCGAATACGATCTTCCAGGATTCTGGTTACGGCACCGTACGAAGAAGAGGCAAAGAGAATAGCGCGCCCGGAGGAAAGCGAGCGCGTAAAGCTCTCTGTCAGTCTTGGGCTCAGTCAAGTCAGGACAACTCCGATATAAGTTTTCTTGTAGAGACGCCGaGTAAAAGTTTGGACACTTCTGCTCTATTCTCACCAGCAACTATGGCTCTAgacgataattttttaacggcAGGAACCAGTCCCGCTAAGACTCCTCACGACTTTATGTTCGTACAACGGAAGCCTAATGCCAAGAGGGCGATCACGTTCGACGCTCCGTTAGACAGTCCCTGTATCATCAGCCCTCTACCTCTCAGGCCGGTAAAACGCGCTAAGTTAAAATTAGAAGCGCAATGGACAACGGTGGCGTGTGGTCGCACGCGTGATCAGCTCGAAATGACTCGCGCCGCCCGACGTTTTCTGAACAATCACGGGTTCCTGCCGTTGCGTCCGCGGTCTCTGAATTTCTGA
- Protein Sequence
- MDIVSNTLDIFTGTNRLPISNAEVTSYQSSFYSPPATEASQSCYDSSSGGESDSEYFSRCNKEQSQVQNRAQNQVQDQIPSTASNQGKHINKGRWTKEEDALLKQLVSTAEQLGTGPRWDVIASHFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDEKVVELVERYGPKKWTLIARHLKGRIGKQCRERWHNHLNPEIKKTAWTEAEDKIIVEAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEGEEGRVVVKGRGKKRNAESASLLLEDSQSQPKPALTSSTEVSTSQTFDINQVDWVRAWEHQQTSTNYQNAQINKQRTHGGEKRVQSPSKRGLSRTKTETISFPKYYNLQQMQNETVGSKSSEIKLMPMPDLEEMSEDQLEKEKSSPPPILRRRKTMYLHRTNISNDSGNHSDYLIIGQHSQTENITPSTPIKQLPFSPSQFFNNLSPETSWVHASTPKASSPGPLTTPQPTGFRRNQHDGNSPRTPTPFKNALAEFERRSGAAQLPATPSRLDALNEIIKQETDRESLAGTSSNTIFQDSGYGTVRRRGKENSAPGGKRARKALCQSWAQSSQDNSDISFLVETPSKSLDTSALFSPATMALDDNFLTAGTSPAKTPHDFMFVQRKPNAKRAITFDAPLDSPCIISPLPLRPVKRAKLKLEAQWTTVACGRTRDQLEMTRAARRFLNNHGFLPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01266811;
- 90% Identity
- iTF_01267491;
- 80% Identity
- -