Pgra008651.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002006095.1
- Location
- NW:44144-92727[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 8.5e-15 53.5 0.1 1 45 568 613 568 613 0.96 2 2 1.7e-17 8.9e-15 53.4 0.0 1 43 999 1042 999 1044 0.94
Sequence Information
- Coding Sequence
- ATGGCGGATTGCCCCTATGCCCGCTGCATACAGGAACGCAGACATATCCGACGGGAGCTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTCGGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCAGCGACGGCACAGCCCCACCATCGGCTTTACCCGGCGTTGTCCTCGTCCTGCAACCAGATACCCGGGAGCCTGGACCAGATTGTTGGGCCGCAGCTACATCACCCGGCACCCTCGTCGTTGCCGTCGGCGGTTGCGCCGACGGTGctgacgacggcgacgaccacgacgacgacgacaacgacggcTATTACACTCGCGAGCGGTGTGGTGAAGCAGGAAAGCCTGCAGAGGCATCATCTGCAaaaccaccaccaccacctgCAAACGCCGGTTCAGGATCATCCGCAGGAGGATTCGCGTCGTCTGAGGCCGGCCGAGATCAAGGTCGAGGCCGGCGACGAGGAGGCGGCCGCGGACGGTGTCGCGCGAGAAGACACCGCAACGAGAACGACGGACACGACGGCAACGTCgtcgacgacaacgacgacgggaggagcggcggcggcggcgacgacgacgacgacgacgatcacGTCGACAACGACAACGGCGACCGGTACGACGACGATAGCGACGAGACGGCGACGCGTACGCCGGCAGAACGACGGGGAGGACGCCGAGGGCGAGGAGGACGGAGACGAGAACGACGAGGAGACAGGACGTGGCCAGAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGTGGTCAGCCCTCTAAGGACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGGACGGAGGAAATTACGTTGGAGCGGGCACCGGTAACGCAGGGCTTGCTGAGGGTAAAAAAGGAAGAGGAGCTGCAGGAGGTGCCGAGTTCTGGTGGCGGAACGACGATACTTACGACGCCGGCGACGGACTCGGAAGGGACCAGGTCGGGGTTGTTATGCCGCGAAGGGAACGCGGCCGCAACGACGAGCGTAGCGACGACGCCGTTTTTCCTCGGAAGACGCGCGAGTCCGCCACCGGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGCCTCGATGGCAAGCTACCCCACGACGACCAGGCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGTTCGCGATCGGCGGAGTCACCCATGTCGTCGGTTCAGGTGGACCCCATGGCGGCGTCCGTGGTCGCTGCCGCCCTCAGCGGCACTTATCCCACCTTACTACCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTCGGGGTGCATACCCACCAGGACAGCGCCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCGGAAGAACAACTCAGGACACGAACATATCTCTACTGGAGCAACAGAAAATACCTCTGAGGATGCCGACAGGCATCGATCCCAAGAGCATCCTCAACTCGTACCGCGCGAAACCGCGAATGACCGGACCGGTTGCggccgcggcggcggcggcggcggcggctgcgGCTGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGAACTTATACCGAGGAAGAGCTGAAGGCCGCCCTCAATGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCTCGTAGCACCCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGAATCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCagccaccaccaccaccaccatcaccaccaccaccaccactactACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAACTATCCGGCGCggaagaggagaaggaagTCGAGAAGGCCCTGTTGAAACCTTTGCTGTCGTTGGAGGATCTTGTCAGGTTCTCCGCGCTCGAAGGAACCGGCAGCGATTCCCTTAGGAACCTGCTACAACGGGGTCACGAGGCGGGAACCGAATGGCCGGGATTGGAACACCCGAACATCGGTCCTTACATTCAGAAGATGTTGGCCGCCGCCGCACCAATGgGCTTAGAGACGCCGAACTATCGCATACCGGACGTGGTGAGAAAGCTGATGACCGAGGACAAGAGGCTGAACAAAAATGTGAACGGCGATCAGTCGCAACCGCACCAGCAGCATCATCATCAGCAACACCATCCCCTCGCGGCGCATCAGCAGACCCAGTCGCAGCAACAGCAGCGTACGTCCCTGTCGAACGACGATTTCAATCCTAACATCGAGGAGGAGGCCAGCGACAGTGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCATTTGCTCAGGGCTTCGCGACTGCGGCCTCGAGTCCGAGTCTTTTGGAGCGAGCCAGTCCAGCGTTCTCCGGCACCAGCAGCCCTACAAACTCGCTGGTTGGCAAAGCGGTAGCCGTTAACTTCCGCGACGTTATTGCCAAGAGCATAAGCGTTAAGTTCCAAGAGGGCCAGACGCCTGGCGCGGCTGGCATGCCAAGTTGCCAACCGGCCGGCGTAGTTCCGCCTCAGCAGGTTGGCAGCATGTTGACCGATCCGAGTCCGTTCAAAAGGGGCCGTTATACGCCCCCGCAACCGCCACAACAGCAGCAACCGCAAACGCCGCAGCAACAGTCGCAACAGCAGCAGTCCAAACAACAGGCGCAGGATGCGAACAAACCGAAGCCGGGTACAGGCGGCAAAGGCACAAGGCCGAAACGCGGCAAGTACAGAAATTACGACAGGGACAGCCTCGTTGAGGCGGTGCGCGCGGTCCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGgGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACAGCGACGACGGCGACAACCGCGGCTGCGGCGATGCGACCGAGCGCTGCTGGCGTTGACAAGAAGCCGCAGCTGAAACCGCAAAAGCCTTTCACGCCGCCGGGCGGCATACCGGGTCCAAACGGATTGAAGATGTCACCGTTTATGGAGGGTATGCCCCACCTGCCGTTCGGGCCATTTAACTTCTGGAACCCGACGCCCTTCATGCCCGCCCCGTTTATGGGTGGCGCGCCAAACGTGCCGATTCTGCCAGAACAATACTTCGCGTCGCAGAGAATGCGCGGATTGCAGGAACAACAACGAAACGCGGCTATAGTGCAGCAGCAACATCAGCCACGAGACCGGGACGGAGTCGGCGTATCCGGAACGGCGGACGCGGCTGGCACTTCGAACTCACGGGGCGCATCGATGTCGAAAGTTACGCGCGAAATGGCAGAGATCTACGATACGCCCGGGGCGAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACGGGCATTCCAAGGGACCAGCGGGCGGCGATGGCGGATGCGAGAAACCAgcagtcgtcgtcgtcgtcgtcgcagcAGCAACACCCGGAAACGATGAGCAGCAAAGCGCTGATCGACCAGCTCTGCAGAAACTCGAGGAGGACTCCGCTGCCGCGGATTGCGCAGGATAGCAGCGAGGACGAAAGTTATCGAGGACCAGCGGGCAGAATAGTGCCCGAGAGGCCAGAGCGCGTGCCCACGGTCGATCTTAGCCCTTCGCCCTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCGCCAACACCCTTGTCCATAACCCGTGCGGGCAGCAGGGATGAGGATAGCACCCGTGACTCGCGCAGCAGCAGAGAGCGCGAGGTTCACAACGGCCAGGAGGATCGTGATCGGAAGCAGCAACCTTTGAGCCTGCAGCAGCAACCGACACAGCTGACTAACCACTACCCAGACATACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGATTACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCACCAGACCCGGCGAATCGACTAACAGCCAGCAGCCGGCGTCGGAGCAACGCGGCCCCACGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSGTRSSESATAQPHHRLYPALSSSCNQIPGSLDQIVGPQLHHPAPSSLPSAVAPTVLTTATTTTTTTTTAITLASGVVKQESLQRHHLQNHHHHLQTPVQDHPQEDSRRLRPAEIKVEAGDEEAAADGVAREDTATRTTDTTATSSTTTTTGGAAAAATTTTTTITSTTTTATGTTTIATRRRRVRRQNDGEDAEGEEDGDENDEETGRGQNEAEKRLKLDEDADRSVVSPLRTENDRATRDHPTANATDTEGTKERTEEITLERAPVTQGLLRVKKEEELQEVPSSGGGTTILTTPATDSEGTRSGLLCREGNAAATTSVATTPFFLGRRASPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSDSSSSSRSAESPMSSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVHTHQDSAAAADQPLDLSAKPGRTTQDTNISLLEQQKIPLRMPTGIDPKSILNSYRAKPRMTGPVAAAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELKAALNDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESLTSTHSHPHEPGAPATTTTTITTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGSDSLRNLLQRGHEAGTEWPGLEHPNIGPYIQKMLAAAAPMGLETPNYRIPDVVRKLMTEDKRLNKNVNGDQSQPHQQHHHQQHHPLAAHQQTQSQQQQRTSLSNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPSLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPSCQPAGVVPPQQVGSMLTDPSPFKRGRYTPPQPPQQQQPQTPQQQSQQQQSKQQAQDANKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTATTAAAAMRPSAAGVDKKPQLKPQKPFTPPGGIPGPNGLKMSPFMEGMPHLPFGPFNFWNPTPFMPAPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAIVQQQHQPRDRDGVGVSGTADAAGTSNSRGASMSKVTREMAEIYDTPGANGSFLDNLIRSSLETGIPRDQRAAMADARNQQSSSSSSQQQHPETMSSKALIDQLCRNSRRTPLPRIAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSITRAGSRDEDSTRDSRSSREREVHNGQEDRDRKQQPLSLQQQPTQLTNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKDYAAVSGLVVQLQRGYNTASTRPGESTNSQQPASEQRGPTLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254708;
- 90% Identity
- -
- 80% Identity
- -