Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: ct
Assembly: GCA_002006095.1
Location: NW:221998-347746[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3e-28 3.2e-24 84.0 0.0 2 72 535 606 534 611 0.95

2 3 7e-33 7.6e-29 98.8 0.0 3 77 946 1021 944 1023 0.96

3 3 2.9e-31 3.1e-27 93.7 0.0 3 75 1177 1250 1175 1254 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3e-28	3.2e-24	84.0	2	72	535	606	534	611	0.95
2	3	7e-33	7.6e-29	98.8	3	77	946	1021	944	1023	0.96
3	3	2.9e-31	3.1e-27	93.7	3	75	1177	1250	1175	1254	0.95

Sequence Information

Coding Sequence: ATGCAGGCCTCCGCGGAGGCCAACTCGCGGAATATAACGACCATGGAATGGCTCTACAAAAAGGAGCCCTTGTTCACGCTTGCTCATTTTTGGCAACAGAGAGCGACTTCGGCGGAGAAAGAAATAGCCGCGCTGAAAGAACAGCTTGCCGCAACGAATGACAGCAATTCCAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAGCAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACCTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGATCAACCAGTTGGTTGAAGAGGTGTCTAGGCTACAGCAGAACCTGCAACGCCTTCAGGAACAAAGTGCGCAAGCAACAGTGCGACTTGAGGAGGAACTCGAAGTGCGGAGGCAACACATCAACAGACTGGAAAGTAAATTGGAGCGGCAGAGGGATTACGACGACCTAAAGCGCGAAATCAGTGTACTGAGATCGGTCGACCTCTCGCAGATACCAACCGGTGAGCCCGGAAAAAGTTTGGAACATCTTCTTATGGAACGCTTCAAGGCGCTCCAGCAAGCCGAGAACCTGAAATCCTCTAATACGCCCGAAGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCACCCCACGGGGTTGGAGGTGTACCACCTACGTCCCATGTGTCCTCCCAACAACCACCGCCACCGCCTCCGACGGCAACCTCCCTCCCTCCGCGTTCCACTCCAACGCCTTCTTCGGCCTCTTCGACAACTTCAAACCTTCTCTTCCCGCCACCTCTTCAAAACGTCGAGACCTTTGGCTCATTCCTTGGTGAAGAAATCGTCGCGAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgtcagcagcaacagcaacaacagcaatcgcagcagcagcaacaacaacaacagccaCAGCCATCCCAATTAAGCCAGTTAActcaacagcaacagcagtTGCAACAGACCCAACCGCACATGGGTCTTCATCCGCCATCAACGCCAAGTAGTTTAAATCACCTGCCATCGCCGGGTGCGGATCCGTCGTCCACTTCGAATACTCCTGCAAAGTCGAATACGCCTATAAGCACGGCTCCTCTGAGTAATTTAGACGTCACTGAGAAAGCTCCAACACCGGTATCGGGACATGAGACGCCAGCACCTCCAACACCATCCTCCACAACCGCCTTAACATCACCGCCGAGCTTCCAACCACCTACGTCGATGGTGGAAACCAATACTCCTTCGGCTTCCATCAACGGCGGCGGTCTCACACCTGGTGTTCCGAGCGCACCTCCTCCGAAAAGCCCGGCCGATCAGGAATCATGTcacaacaataacaacagcCACCATCTAGCGAACAATAACATCGGTGGTCTGAGCGTTCTCGACACACTAAAAAGTCCATTTCGGTTTGACGATCGAACGTATCCGTTCCGATTCGGTGACGAGTTCGGAGCCGCTGGTATGGCCGGTCGGCTGGGCGAGTCTCTCATTCCGAAGGGTGATCCCATGGAGGCGAGACTGCAAGAGATGTTACGTCACAATATGGACAAGTACGCCTCGCAAAATCTCGATACTCTTCACATAGCGAGACGAGTGCGGGAGTTGCTGTCGATACATAATATCGGACAGAGATTGTTCGCCAAATATGTTCTCGGACTGAGTCAGGGCACGGTCAGCGAGTTACTTAGCAAACCCAAACCTTGGGACAAACTGACCGAAAAAGGCCGTGACAGCTATCGGAAGATGCACGGTTGGGCTTGCGACGATAACGCTGTAATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCAGCATTCGCACGTGGGCCACAGGATGGTGGTCCGCCAGAAATGAATGACGAAAGATTGGCACATATTCTCTCGGAGTCGGGCCATATGCAAATGAGGAGTGAGCACGAGGTGTCGAACGACGCAGACAGCAAGAGTCCGAGCAGAATCGGTTGTCCGAGTCCGTTCAACAAGGACAGACTTGACAGCCAAAATAGGAGACTGAAGAAGTACGAGAACGACGACATTCCTCAGGAGAAGGTGGTGAGAATTTATCAGGAAGAACTGGCCAAACTGATGGGCAGAAGAGTGGAGGACCTTCGTCCGCGAGAGTTTTCTAGTGCGATCTTTCCGCATTTTTTCAGTGGTACACAAAGTGGTCTTCAAGGTATCGAGCGTACCCAAGAAGACATTCGACTGGCCTTGGACGCTTACCACCGTGAGCTTCAAAAGCTGAACGCAGCACCAGGACAGACACCCTCGATGACTGGATTGCCAGGATTGCCCGGACTGCCAGGTTTGCTGGCGCTTCAGCAACAAGCTCTTCAGCAACATCATTTGGCCGcgaacggcggcggcggcggcagtgTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGCGCAACAAAATGATAAACGGTGTGTcggaagaggagaaagagaaaatggaAGAGGCGATGAGGCACGCAGGAAGTGCTTTCTCTCTGGTGAGACCAAAGCAGGAATCTACAGGCCCGCAATCGACGCCCGGCGGTTCCAGCGCGAGTTCACCGCTTGGCAATTCTATACTCCCTCCTGCAATGACACCTAGTGAAGAATTCTCCAGCGCGGCGGCAGCCAGTCCTCTTCAAAGGATGGCATCCATCACGAACAGTTTGATAAGCCAACCGTCCACGCCAACTCACCACTCGGCCAATCAAAGACCGTTGAAAGCTGTGCTTCCTCCAATTACGCAGCAACAATTCGATCTGTATAATAATCTTAACACCGAAGATATTGTCAAAaggGTGAAAGAACAGCTGTCTCAGTATTCGATTTCACAGCGGCTATTCGGCGAGTCAGTATTGGGTTTGTCTCAGGGATCGGTATCGGACCTTCTAGCGCGTCCCAAGCCATGGCACATGCTTACCCAAAAAGGTCGCGAACCCTTCATTCGAATGAAGATGTTCCTCGAGGATGACAACGCAGTACACAAGCTGGTTGCCAGTCAATACAAGATTGCTCCGGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACACCTATGAAACCTATGCCGCCGACAAAACTCGTCCAAGAGCAGTTGCAAAATGCAGCGAAGGCACAGGCTGCTGCTCAAGCGGCCGCGCAAGCAGCGGCACAACAGCATCAGCAGGAGAATCAGGTGCAACTTGGCCCGCCTCAGCAAAGTCCTCAGCATCTACAGCATCCGCAACCGCCACCACCAATGATGTTGACTCCGCCTGGACCTCATCATCCTCACACTCAACTCAGCATGCAGGAGCTCCAGAAgaagcaacaacaacagcaacaacaaatGTCATTGCATTCGCCGCATCATCAGATGGCGCCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCGAGCGTGTACGAGATGGCTGCCCTCACGCAAGATCTCGACACGCAAACGATCACCACGAAAATCAAAGAAGCGTTACTGGCCAATAATATCGGCCAGAAAATCTTCGGCGAAGCGGTTCTCGGTCTTTCGCAAGGTTCTGTCAGCGAGCTTCTGAGCAAACCGAAGCCGTGGCATATGCTTAGCATAAAAGGCCGTGAACCTTTTATCAGAATGCAGCTTTGGCTGTCAGACGCGCACAACGTCGATAGACTGCAAGCATTGAAAAACGAGCGACGAGAGGCAAACAAAAGACGACGCAGCAGTGGTCCGGGTCACGACAACAGTTCTGACACTTCGAGTAATGACACCGCTGAGTTTTATCACGCAGCGTCACCTGGTCCGGGACCCACCACCGGTAAGAAGCAACGTGTTCTCTTCTCTGAAGAACAGAAAGAAGCTCTCAGACTCGCTTTTGCCTTGGACCCGTATCCTAATGTAGCTACCATCGAATTCCTCGCCGGTGAACTCGCCCTATCCTCGAGAACAATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAGCAAACGCCACACGGTCAACCGGAACCACAATCGCCACGAGAACCTGGCCAGCCTTTCGATCCTGTTCAATTCAGATTACTACTGAACCAAAGACTGTTAGAGAttcaaaaagagagattgGGATTAGGAAATGTACCTTTACCTTACTCTCCATATTTCAATCCCAATCTGGCGGCCCTAGTGGGTAACGCGTTGAAGGAGCAATGCTCCGGCCTCGATCTCTCAATGAACGCTCTGAAGAGAGAACCAAATCAGGAGTTCGAGGACGAAGATGTCGAGGACGCGATGAGTAATCTAGGTAGTGAAGATTCGGAAGGTTCGGCCAGCAGTATAAAGAGAGAACCCGCGGAAACGCCGACGGCACCCGCGACAGTTAGGTCTAACAGAAGAAAACCTGCAGCACCGCAATGGGTGAATCCGGAATGGCAAGAACCAGCAAGAACAGGCGACGAAGTCATTATCAATGGTGTTTGCGTGATGCAGACGGATGATTATGGTGTGAAGAGGGAAGCCGAGGAGACCATAAGAGTCGAACCGACACCCGTTCAGGACCGGTACGAAGAGGACGCTCAGAGCGACGTCTCTTCCGTGTCCGCCAACAATGGGGCCGATCGGGACAGTCCGCTTCCCAGTCCAAAGTCTGGTCAAAATAGCCCAGTGACGTCACTCAGACCGCCGTCGGCACAACAAACGCAACAATCAACAGAAGAAAGTCCGAAGGACGTGGTAAAGCAAGAACCGGAAGAAACGTGGGATTACTAG
Protein Sequence: MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDSNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEINQLVEEVSRLQQNLQRLQEQSAQATVRLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKSSNTPEALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTATSLPPRSTPTPSSASSTTSNLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQSQQQQQQQQPQPSQLSQLTQQQQQLQQTQPHMGLHPPSTPSSLNHLPSPGADPSSTSNTPAKSNTPISTAPLSNLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETNTPSASINGGGLTPGVPSAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMNDERLAHILSESGHMQMRSEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFSSAIFPHFFSGTQSGLQGIERTQEDIRLALDAYHRELQKLNAAPGQTPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGGSVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPSEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQVQLGPPQQSPQHLQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSASSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSANNGADRDSPLPSPKSGQNSPVTSLRPPSAQQTQQSTEESPKDVVKQEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00729955;
90% Identity: iTF_00221825;
80% Identity: iTF_01270399;