Pgra004107.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- nfil3
- Assembly
- GCA_002006095.1
- Location
- NW:197101-214883[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-14 4e-11 42.0 0.4 2 58 160 216 159 221 0.91 2 2 2.3 1.2e+03 -1.2 0.1 42 53 430 441 419 445 0.60
Sequence Information
- Coding Sequence
- ATGGTGGCAGAGTTCGTCGTCCATCGCCAGAGTGGATCGCCCATCAATGGTGAGACCGCGTGTCTGAACGGCAGTGTACCGGCTACGCACACAATGACGCACGGTGGCGCACACGGTGCGCCTCATAGCGGACCTCACGACGTTCACAAACCCCTCACGGTGCCCCTCACCCATCCCGGTCATCACGGTGGACCGCCGGCTGTGATTCAGCAGCAGCATCAGCACCAggcgcagcagcagcagcaacaaccgCCGCCGCCTCAGCAGCCGCCGCACCATCATCATCACCATCAggcgcagcagcagcagcagcagcaacagcagcagcagcaacagcaacaacaacagcagcagcatcaCCATCACGACGGACCGCAGGTGACAACGCATCCGGACAACCTGCAGCCCAACTTCGAGATTCGCAAGGAGTTGTTCTCGCAGCGCAAGCAGCGCGAATTCATCCCCGATAACAAGAAGGACGATAGTTACTGGGATCGTCGTCGGCGCAACAACGAGGCGGCCAagcgatcgcgcgagaagcgTCGTTTCAACGACATGGTGCTCGAGCAGCGCGTGATGGAGCTCAGCAAGGAGAATCACATACTCAAGGCGCAACTGGACGCGATACGCGACAAATTCGGCATTTGCGGGGAGACGATCATCAACACGGAGCACGTGCTAGCGGCAATGCCGACCGAGCCGATCGTGAAGCGTGCCAAACTGCCGGCGTCCGCGCTTCTGTACGCGCGCACGCCGAGTCCGGTGCATACTTCGGTGATACACCAGCCggtgaacggcgcgcggtcGCCGCGCTCACCGGCCTCGCAGCTCTACGTACCCGAGACCACCGCCTCTACATATCCGGAGACCGAGAGCTTCCAATATCCGTACTCGCATCATCCGGCGATGCATCATCTCGACACGACGAGCGCGCTCAATTTGTCGTCGCGCGCACGCCGCGCCCAGTCGCCATTCGAGCTGTCGTCCGGCAGCGGCGACGAGGCCGGTTCGCAGATAGTCGTCACCTCCCAGAACAACGCGGCTTCGAACAACAGTCTGCCGCACAAGCTCAGGCACAAGTCGCGCATCGGCGACAAAGACGCGGCGAGCGCGTTGCTCGCGCTTCAGGGTATCAAACAGGAGCCCGGACCGAGAGCGTCGCCGCCCTGGGACAACGGAGAGGGTTCCAGCGACGAGCGCGATTCCGGTATTTCGTTGGGCGTCGAGTGGACCGGGCCGTCGGTTCCGACAATAGCGGAGAGCGGTCGCGATATGAAGCTGAAACTGGACCGTTTGGCATCCGAGGTTGCGTATCTGCGCGAGTCGATGTTACGCGCGCAACCGGCAGTCGCCGCTGCGACAGCGGACAGTCTGGTGACGGGATGCTCTGTCGCGACTGCCAGCGGACCGTGA
- Protein Sequence
- MVAEFVVHRQSGSPINGETACLNGSVPATHTMTHGGAHGAPHSGPHDVHKPLTVPLTHPGHHGGPPAVIQQQHQHQAQQQQQQPPPPQQPPHHHHHHQAQQQQQQQQQQQQQQQQQQQHHHHDGPQVTTHPDNLQPNFEIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLDAIRDKFGICGETIINTEHVLAAMPTEPIVKRAKLPASALLYARTPSPVHTSVIHQPVNGARSPRSPASQLYVPETTASTYPETESFQYPYSHHPAMHHLDTTSALNLSSRARRAQSPFELSSGSGDEAGSQIVVTSQNNAASNNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDNGEGSSDERDSGISLGVEWTGPSVPTIAESGRDMKLKLDRLASEVAYLRESMLRAQPAVAAATADSLVTGCSVATASGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126457;
- 90% Identity
- -
- 80% Identity
- -