Pgra008808.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- cnc
- Assembly
- GCA_002006095.1
- Location
- NW:325214-415010[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-15 9.4e-13 47.3 8.4 3 65 721 783 719 783 0.96
Sequence Information
- Coding Sequence
- ATGGCACATAAGAAGAGGAAGCAACCGCGGATAATCGTCGTGTTCGTGCCATATGATGATATTGCTTTCTTGTTTCAGGATATGGATCTCATCGAGGTTCTGTGGAAGCAGGATGTGGATTTGGGATTCACTCTGGTGGAACCGACGCCTACCAAAAAACCGTCTACATCCGAAAAAGAATCGGCGGATGAAATCGAGAAGCTGAAGGCCTTGGAAGCTATTAACTCCGCCAATCAAAAgGACGACGCGGCGAAAGAACCCGAAGAATCGCAAGAGGATGATCCTTGGGCAGGACTCCCGTACACCGTTGATCTAGAAACTGGCGAGTACATTCTCAGTTCCGGAAGTCAGAACGGAAGTCAAAGTAGCATCGTCGACAAGGACGATCCGCTTCTCAACGAAGCTTCGTTGGCTTTGGACAACGATCCCTTGGCTGACTTAACGAATGATTCTCTCGGATTAAACGACACTCTAGGACTCGAGCATGACTTTACTTCAGAATTACTCGGTGGTGGTCTCTTGGAAAGCGGCGTAGAGGGTCTTCTTAGCAACGATACTTTGGGCTTGCCCGACGAATTCAATCTCGAGGAGGCGCTTCAGCTCGTTGGCCTCGATGAGGCTCAACCAGAGGAAACGAAGCCGGAAGtgaagaaggagaaggaagaggacACAGTCGAGGATTCCGCGAGAGCAGAGGACGACGCGGGCATCACCGCCTCGAGTAACACCGAGGTCGCGAAGTCATCCAAGTGCGAGGATCCCGAGACCGGCGACATGATTCACACACCGCAGTTTCATCATCCACATCATCCGCACCACCGCTCCTTCCAGGGTCGCATGCCGTTCATGCGAGCTATGGGCATGGAGCAGCGGTGGCAGGATATCGCGTCACTTCTGTCCCTGCCGGGAGCACCGGATCACTTCGCGCATCCCGCACATCCTGGATATCCAGGACACGGTATAAGTCACAGTCATTACGAGGCTCAGCGCAACGTGTTACTTCACAATCCCACGTTAGCGCCCCCCGTCGGAGATTTGAATTCGACAGGACCTTATCACAATGTGGGTGGGTCGTCAAATTTGGGTTCAGCTGTGGCAACGTCGATGAATTTGACAAACAGTAGCGAGCCAATGGGTGCGGAAAGTGGGGCGACTTACAAATCTGAACCTAACGATATGATGTATTATCACGCACCTCCAACAACAGAACCCATCAACCAAACCGACGGATTTCTTTCGTCTTTACTTAATGACGAGGACTTGCATCTGATGGATATGGCCATGAACGACGGCATGTACACCATGCGAATGTTGGACAACGGTAGCAACAATGCGTCCGGACCGACCGGCGCGGCGGCTCTACCGGGTGTTCAAACAGCTGGTGGCACAACTCCAGCTACAACGGGCGTCACGACTTTGCCTGGTGTAACCGACGAAAGAATGGACGCTTCGAGCGATAGCGCCGTGAGTAGCATGGGAAGCGAACGCGTACCGTCTCTGTCGGACGGCGAGTGGATGGAAACTGGATCCAATTCCAGTCATACTCAGGCGGACTCCCATTACACCATGGATTACGCGAGCAAGTATCGCATGCCATACGACTGCAACTACTCGGTATCCGGGAGAAACGCCGCCTCTCCGAGATGTCAGACGGAACGAACGGTGCCGCCTGTCGCGCAGAAAAAACATCAGATGTTCGCCAAGCGATATTTTCAGGAACAAGGCACTTGCTCACCTTTAGGGGCTACCACACACCCGACCACTCCGATGAAGTACGAATACGACACGCACACGGTCGGTGCCGGTGCACCCGCAAACACGTATTCCGGACCAATCGAGGGTGCAGCCGGGCCGCAGTCAGAATTGAAATACAGTTATAGCGTGGATTTCAGCCGTCATCAATCcggGCGATCTGCAATAGAACATGTTCATCATAATCACACCTATCATTTACCTGCCGAGAGCTCAGGTTCTCTTCAACGTCCTATTTCCCGTGACAAGAAagTTCGCAAAACTGAAGAAGAGCATCTAACGAGAGAtgagaagagagcgagagcgttAAATGTACCGATCGCAGTCACTGACATCATCAACCTTCCCATGGATGAGTTTAACGAACGTCTCAGTAAATATGATCTCAGCGAAGCCCAACTATCCTTAATACGCGACATTAGAAGACGAGGCAAAAACAAGGTCGCCGCGCAGAATTGTCGTAAACGCAAATTAGATCAAATCATAAGTCTGGCTGACGAAGTAAAAGAGATGCGAGATCGTAAGAACAGGCTTCTTCGCGAGCGCCAATACATGCTCATTGAGAAGCAGCGAGTGAGAGACAAATTTAGTCAGCTTTACCGTCACGTTTTTCAGTCCTTACGAGATCCAGATGGTAATCAATACCATCCGTACGAATATAGTCTTCAACAGTCTGCGGACGGAAATATTCTACTAGTTCCCAGAAATCAGACGAATCCGCATCAGTCACATCAATCTTCGATAGAGCCGAAGACGAAACCCGATCCCGAGCGCAAGGAATGA
- Protein Sequence
- MAHKKRKQPRIIVVFVPYDDIAFLFQDMDLIEVLWKQDVDLGFTLVEPTPTKKPSTSEKESADEIEKLKALEAINSANQKDDAAKEPEESQEDDPWAGLPYTVDLETGEYILSSGSQNGSQSSIVDKDDPLLNEASLALDNDPLADLTNDSLGLNDTLGLEHDFTSELLGGGLLESGVEGLLSNDTLGLPDEFNLEEALQLVGLDEAQPEETKPEVKKEKEEDTVEDSARAEDDAGITASSNTEVAKSSKCEDPETGDMIHTPQFHHPHHPHHRSFQGRMPFMRAMGMEQRWQDIASLLSLPGAPDHFAHPAHPGYPGHGISHSHYEAQRNVLLHNPTLAPPVGDLNSTGPYHNVGGSSNLGSAVATSMNLTNSSEPMGAESGATYKSEPNDMMYYHAPPTTEPINQTDGFLSSLLNDEDLHLMDMAMNDGMYTMRMLDNGSNNASGPTGAAALPGVQTAGGTTPATTGVTTLPGVTDERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYASKYRMPYDCNYSVSGRNAASPRCQTERTVPPVAQKKHQMFAKRYFQEQGTCSPLGATTHPTTPMKYEYDTHTVGAGAPANTYSGPIEGAAGPQSELKYSYSVDFSRHQSGRSAIEHVHHNHTYHLPAESSGSLQRPISRDKKVRKTEEEHLTRDEKRARALNVPIAVTDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKNRLLRERQYMLIEKQRVRDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNILLVPRNQTNPHQSHQSSIEPKTKPDPERKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01523125;
- 90% Identity
- iTF_00867900;
- 80% Identity
- -