Pgra008381.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- ATFC
- Assembly
- GCA_002006095.1
- Location
- NW:592818-602447[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 2e+03 -1.8 0.0 37 47 291 301 289 310 0.58 2 2 6.6e-16 3.6e-13 48.6 11.1 2 63 319 380 318 382 0.95
Sequence Information
- Coding Sequence
- ATGTCCCATTTGGATCAGGAGATGTGGAAGTACGAGCCGGTGTCCCCTGCCGGGACATCGCCTCATGAAATTGATGACGAGTGGTTTTTACTTGATAAGTCTGTAGAGAGTCCTAAAAATGCTGCAGAGCCCGTTATGTACGATGACTACCCTTCCCGCGCACAAGTGGCCAGGAAACtattggatcaactggacgaATGGATCAAAGAAgAACCCTTCTCGGATTGGCTGgaagaaaaaattgacttGCCCATATTTGAGCAACTTCCAGTTTCGGAGAGCAGCCCAGTTAAAGCTCCGCAACAGTTGATAATTTATCCACCTGTTGTAAAGGggcaacaacaacaactgcAACATCAAccgcaacaacagcagcaacatcATGAAccgcaacaacagcaacatcaaccgcaacagcagcagcaggaTGACACCCAGATCCTCTTGCAAGAATTCGAAACTGTTTTGGGAGATGTCGAGGCTTGCCATCAGATCGTTCCACCGATCAGCTCGTCGACGCTCACTCCTCCTCAATCACCGCCGCATAAAGCAATTAATGTTGATACGCAATTGCTGGTCACACTACAGCCTGTGCAGCCGTTATTTACCAACACTCAAACTGAACCGATTTATAACATGATCGTTCCGACGACGGAAGAGTCGTTGTATGCGAATGACGCGCCGCGCGAATGGAACACCGAAAACATATCGCTGAGTCCGTTCGGTGGGGATGTTGTGAACGATTTGGCAGTGGTGGATGAATACGTTCGCACGCATGCTAAAGACTTGCCGTCACCCTCGAGCCCATGTGTTAGCTCCGGCAGCAGTTGTATCTCAACCGAGGATTCCACCGACGATCCCGATTGGAGTCTCGAGTCCGagagaaaaagtttgaaaCAATCGGTTTACGATTCTTCAAAGCATCGCCACAAACCGTATTCCCGGTCATCTCTCGAGGACAAGAAAGTACGTAAgaaggaacaaaataaaaacgcggCTACGCGTTACAGACAAAAGAAGAAGCAAGAGATCAAAGAGATACAAGGAGAAGAACGCGAGCTTGCGGATCATaatgaaaaactaaaaaccCAAGTGAAAGATCTTCAGCGCGAAATCGGATATCTAAAAGGGTTGATGAGAGATCTGTTGAAGGCCAAAGGTCTTCTTAAGTAA
- Protein Sequence
- MSHLDQEMWKYEPVSPAGTSPHEIDDEWFLLDKSVESPKNAAEPVMYDDYPSRAQVARKLLDQLDEWIKEEPFSDWLEEKIDLPIFEQLPVSESSPVKAPQQLIIYPPVVKGQQQQLQHQPQQQQQHHEPQQQQHQPQQQQQDDTQILLQEFETVLGDVEACHQIVPPISSSTLTPPQSPPHKAINVDTQLLVTLQPVQPLFTNTQTEPIYNMIVPTTEESLYANDAPREWNTENISLSPFGGDVVNDLAVVDEYVRTHAKDLPSPSSPCVSSGSSCISTEDSTDDPDWSLESERKSLKQSVYDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIKEIQGEERELADHNEKLKTQVKDLQREIGYLKGLMRDLLKAKGLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268753;
- 90% Identity
- -
- 80% Identity
- -