Pfla002054.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- grn
- Assembly
- GCA_014825475.1
- Location
- QVNW01001836.1:19640-25530[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 7.8e+03 -3.0 0.0 16 23 22 29 20 30 0.70 2 2 5.5e-19 1.6e-15 56.7 4.8 1 35 84 117 84 118 0.97
Sequence Information
- Coding Sequence
- ATGAAGGGAAAGGGTGGCAAAGAAAAAAAGAAAGAAGAGCAAGAGAAGGAAGAAGAGGAGGAGGAAGAGGAGAAAAGAACTGAATGCACGCTGCTGTGCACCGGAGCGCGCGCGCTAGTGTTAGGAATGTGGGTTAAATCTAGCCGCGCGACAATCGTCCGAAACGTCGTCGTGACGGGTGTGATATCTGTGTCTTCTCTTTTTCCAAAACTGTCGCTGCAGAGTGCGGCGAGACGGGCAGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACTCTCTGGCGGAGGAACCAGGCCGGCGAGCCGGTCTGCAACGCCTGCGGACTCTACTACAAGTTGCACAACGTGAGTAGTGCTCATTAA
- Protein Sequence
- MKGKGGKEKKKEEQEKEEEEEEEEKRTECTLLCTGARALVLGMWVKSSRATIVRNVVVTGVISVSSLFPKLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVSSAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -