Pfla021336.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- Trerf1
- Assembly
- GCA_014825475.1
- Location
- QVNW01000104.1:3741-15171[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9 8.7e+03 -2.7 0.1 30 42 662 674 661 675 0.89 2 2 2.7e-10 4e-07 30.4 0.0 2 46 827 871 826 871 0.96
Sequence Information
- Coding Sequence
- ATGAGAGGAAAAAAAATTGCGCGGGCTTTAAGGGAAATTCCCGCGCTTAGTAAGTTGGAAGGCAGAGCCCGTAGCATCGCAGACGCGGAGAACAAGAAGACCGAGAAGAAAGAAGGCGTCGGTCCGCCTCTGCAGACAGCGTCCGTCAGCGTGAGAGCGTTGATCGAGGAGAAGATCATACAGAAGAGAACAACAGCAGCGGAAACGAATGTCACTCAACAGCCTCGTACAAACACCACCGTTTTCACCACCCAAACCGACGTTGTCTCGCAAGTCGCCGGCAAGACGAACTTTGCGGTACCGGCACCGCCACCTTTGGCGGCGGGAGATAAAGCGCGTCGGCTTTCCGATGGCGAACACTTCCGGCAGCCTAACGTCACCGTGGCCAGTCATACACCAATGCAAAAGCAACTGCAAGATGCGCAACAAAGAGCTCAGGCTCAAGCGCAAGCGCTTGCCGACCTAATCTTGAAGGGTTCGAAGGTGGCTGTGAAGCGAACGACTTCCGATCCGGGACAAAGATTACAGCTGACACCTTATCAGCAGTCTGTGCAATCAACGACTAGCAATCAGCAGCAAACGAATAATCAGCAGCCGCAGCAGTCGCAGCCTACGGTAACGGAAAACTTCACGATGACGGGTTACTCCGAAGACGGCGGCTACTTCAGTCCGACTCTGCAGGACGAGGTGTTTCAACAGGTTACAACAGTTCCTGATAGCGTGCTTCTGCAGGCTACCCAGTTGGACTCGATTCAGTTTCAGACGACCAGCTTGTTACAAGAACAATCCAACGAACAGCTGCAGGATATCACGCTGGAGGACCGGTACTCGTCGCAACACACCGTCAATCCAGACCTTCAAGCGTTAGTGAACTCGCCATTGCCCGATTCTCTTGCTGAATTCGGTACTTATGCCGCGCAATATACAGAAAGTCCTCACACATTGCCTACCCAATCGCCTCTGCCGTCGCCTTTGACGCGACACGATAGCCCGAGCTTCACGTATCCCACACCACCAGCCAGCCAGGAAGGCCTGCTTACCGGGAGCCTGCCACTGCTGAGTCCTCAAGAGGATCCGGAGAGCGTGAGACAGGTGTCGTCGCCGCTCTCGGCGGCGTTCTACACCACCACGATGTCGTCCGCCGCGGCTGTGGAAGAGGCGCTGAACGAGGTGCTGCCGGGAGAATCCGACGCGGACGCGGACCTCTACGGGTCCAGTTCGCCGAATCCGCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCAGCACCATCGCCGCTGTCCTCGCTACCGCCGTCCTCCGTCTCGTCACCGGGACCAGTGTCTTTTACCGGCGCGAGCTTCCCCGTGTCGCCGCATCACACGCTCCAAAACCAGATGATGCCAAACTCGGAAGATCCGCTGCTGTCTTCGACACCGAAAGACTTTGCCGCCTCCGGTCGCAAGCGATTCGAGTTCCAGTCGTACAAACTGATCACGAGCCAGAACTTGATGGATTTCGGCCTCGGAAATGGCAGCTTGGCCGGCATCGTTGTCGACAACAACGGTGAGTTCAAGCTGATACAGACGGCGGGTCTGCAGAAGGCAAATGTGTTGGTGCAAACGAACTCGCTCAATCCAGCGTTAGCGATCAAGAAGGAGATTCGTTTGACGACTCCGAAAGTCGAACCCGTGACCGCGAATCTCGGTCTAAACGTTCAAGCAAATCAACAACAATGCAACACGGGACAATTCGGCCACCAACATGTCGTCTATCCGACTAAATTTCTAATTCAAACTAATCACGCGACAAAACACAATGACCTGAAGCACAAATCGGCCAATGGAAGTTTGCCAATACCTATCGATCAGATCAAGGAGGAAGTGTACGACATAGAAGACGTGCTTCTCGGCTCTGGCAGTTTATCCGCTAACAGCCCCGTGCGACACTGTCGGAAAAGGCCGCGTATAGACAGCGGTCAGTACATCAACAGTTCGTATTCTTATCCTTCGCGATTGCGGAAGGCTTGCGATCGCCACTGGGACAGCAGCTACACGCCACCGCCGATTCTGGACCCATCTCGTCCCGGACCGGGTCTGTACGCCAGATTACATCAGTACGACAGAGATTCGGACTTCAGTTCGGACGATTCTCAAGGAAATGACGGCCCACCGCCAAGGATCAATATTGGCACGAGATATCAGGCCACGATACCGCCGCTCAAGCAGGACAGGTACAGAGAAAAGAACGGTTCGGAGGCTGATCATCTTCTGTGGGATCCTGGCATAAACAACGCGCTCACGAACACCGAATTGGAGATGTACCTGCAGTTCGCGTGTTGTGCCGCGATGCCAGGCGGCGGTAGGAACAAGGAATATGCGCTTCATCTACTGCACATGTGCAAGGGAAATATTCATGAGGCGATGGTTAAGTTAATGCGACCAACTCCCACATTACCGGTGGAACATCCACTGCTCAGCTACGAGTGTCACGAGTCTGATAGATGGACGTCGCATGAAATGGACGCGTTTTATCAGGGACTGCTCAAGTACAACAAAGATTTTTCCGCGATTTCGCGAGACGTTGGTGCCAAGACAGCCAAACAGTGCGTGCAGTTCTATTATCTCTGGAAGAGGCTCTGTCCTGACGAATACAAGACAGTGCGTATGTGTCACGGAAAACTAAAGATCAAGAGCGAAATCAAAAGCGAAATCAAAGATAGCAAAGACACCAAGGAACTTCGCGATGCTATCGCGTCAGTGACGGAAATGGACTTCAGCGAAGAGAAATCAATCTTTCACCGTACCTTGCATACAAACGAAAGAGAAAATTCTGCAACTTTAACCACCAGCGACGGAGAACTGAGGTTATTCGCATACGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCAACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCCACCCTACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCACACATGAAATCTCACAGACCAATACCTTTGCCCGATTCAACGGCTCAGGAATCTAAGCGACCCGCGCAACAACTGTCGAAAGCGCAACAACTTCAACAACCACCACACCAAAGCCAGCAACAGCTGGACAATTCTACACCACAACCTCAAGACCACCAACAACAACTGCCCGCGAATATCAGTGACAACAGCGCCCACAACACAACACATTTGTGTCACAATCCGACGAGGCCCCCATAG
- Protein Sequence
- MRGKKIARALREIPALSKLEGRARSIADAENKKTEKKEGVGPPLQTASVSVRALIEEKIIQKRTTAAETNVTQQPRTNTTVFTTQTDVVSQVAGKTNFAVPAPPPLAAGDKARRLSDGEHFRQPNVTVASHTPMQKQLQDAQQRAQAQAQALADLILKGSKVAVKRTTSDPGQRLQLTPYQQSVQSTTSNQQQTNNQQPQQSQPTVTENFTMTGYSEDGGYFSPTLQDEVFQQVTTVPDSVLLQATQLDSIQFQTTSLLQEQSNEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFGTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRQVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESDADADLYGSSSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGASFPVSPHHTLQNQMMPNSEDPLLSSTPKDFAASGRKRFEFQSYKLITSQNLMDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKANVLVQTNSLNPALAIKKEIRLTTPKVEPVTANLGLNVQANQQQCNTGQFGHQHVVYPTKFLIQTNHATKHNDLKHKSANGSLPIPIDQIKEEVYDIEDVLLGSGSLSANSPVRHCRKRPRIDSGQYINSSYSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYDRDSDFSSDDSQGNDGPPPRINIGTRYQATIPPLKQDRYREKNGSEADHLLWDPGINNALTNTELEMYLQFACCAAMPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPVEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKTVRMCHGKLKIKSEIKSEIKDSKDTKELRDAIASVTEMDFSEEKSIFHRTLHTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTLLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTAQESKRPAQQLSKAQQLQQPPHQSQQQLDNSTPQPQDHQQQLPANISDNSAHNTTHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422166;
- 90% Identity
- iTF_01268212;
- 80% Identity
- -