Pfla005854.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014825475.1
- Location
- QVNW01003404.1:7619-28303[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 1.8e-14 53.5 0.1 1 45 567 612 567 612 0.96 2 2 1.8e-17 1.9e-14 53.4 0.0 1 43 997 1040 997 1042 0.94
Sequence Information
- Coding Sequence
- ATGTCGCGCAAGAGTCGCTGCAACATTAATGTTTTCGAAAATAACGATAAGGACTGCGTGGAAGTAGAGCGTTTAAATAATGGCCGTGCACGTCGACGATGGACTAGCGCGATGGGCGTAGTCATTCGTCTGGAACGGGTAGCAGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCAGCGACTGCACAGCCCCACCATCGGCTTTACCCGGCGTTGTCGTCGTCCTGCAACCAGATACCCGGGAGCCTGGACCAGATTGGGCCGCAGCTACATCACCCGGCACCCTCGTCGTTGCCGTCGGCGCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGCGACCGGTGTGGTGAAGCAGGAAAGCCTGCAGAGGCATCACTTGCAAAACCACCATCACCATCTGCAAACGCCGGCTCAGGATCATCCGCAGGAGGATTCGCGTCGTCTGAGGCCGGCCGAGATCAAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGACAGGACGTGGCCAGAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGTGGTCAGCCCTCTAAGGACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGTTACCGACACGGAAGGGACCAAGGAACGGACGGAGGAAATTACGTTGGAGCGGGCACCGATAACACAGGGCTTGCTGAGGGTAAAAAAGGAAGAGGAGCTGCAGGAGGTGCCGAGTTCTGGTGGCGGCACGACGATACTGACGACGCCGGCGACGAACTCGGAAGGGACCAGGTCGAGGCTGTTATGCCGCGAAGGAAACGCGGCCGCAACGAGCGTCGCCGCGACGCCGTTTTTCCTCGGAAGACGCGCGAGTCCACCACCGGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGCCTCGATGGCAAGCTACCCCACGACGACCAGGCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCCATGTCGTCGGTTCAGGTGGACCCCATGGCGGCGTCCGTGGTCGCTGCCGCCCTCAGCGGCACTTATCCCACCTTACTACCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTCGGGGTGCATACCCACCAGGACAGCGCCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCGGAAGAACAACTCAGGACACGAACATATCTCTACTGGAGCAACAGAAAATACCTCTGAGGATGCCGGCAGGCATCGATCCCAAGAGCATCCTCAACTCGTACCGCGCGAAACCGCGAATGACCGGACCGGTTGCGGCCGCGGCGGCGGCGGCGGCGGCTGCGGCTGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGAAGGAGAACTTATACCGAGGAGGAGCTGAAGGCCGCCCTCAATGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCTCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGAATCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACCACCACTACTACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCTCGCAAGTGGACGAGGTGGACGACAAAGAACTATCCGGCGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTGAAACCTTTGCTGTCGTTGGAGGATCTCGTGAGGTTCTCCGCGCTCGAAGGAACCGGCAGCGATTCCCTTAGGAACCTGCTGCAACGGGGTCACGAGGCGGGAACCGAATGGCCGGGATTGGAACACCCGAACATCGGTCCTTACATTCAGAAGATGTTGGCTGCCGCCGCACCAATGGGTTTAGAGACGCCGAATTATCGCATACCGGACGTAGTGAGAAAGCTGATGACCGAGGACAAGAGGTTGAACAAGAATGTGAACGGTGACCAGTCGCAACCGCATCAACAGCATCATCATCAGCAACACCATCCCCTCGCGGCGCATCAGACGCAGTCACAGCAGCAGCGTACGTCCCTGTCGAACGACGACTTTAATCCTAACATCGAGGAAGAGGCCAGTGACAGTGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCATTTGCTCAGGGCTTCGCGACTGCAGCCTCGAGTCCGAGTCTTTTGGAGCGAGCCAGTCCAGCGTTCTCCGGCACCAGCAGCCCTACAAACTCACTGGTTGGCAAAGCGGTAGCCGTTAACTTCCGCGACGTTATTGCCAAGAGCATAAGCGTTAAGTTCCAAGAGGGCCAGACGCCTGGCGCGACTGGCATGCCAAGTTGCCAACCGACCGGCGTTGTTCCGCCTCAGCAGGTTGGCAGCATGTTGACCGATCCGAGTCCGTTCAAAAGGGGCCGTTATACGCCCCCGCAACCGCCACAACAGCAGCAACCGCAACCGCCGCAGCAACAGTCGCAACAGCAGCAGTCCAAACAACAGGCGCAGGATGCGAATAAACCGAAGCCGGGTACAGGCGGCAAGGGCACCAGGCCGAAACGCGGCAAGTACAGAAACTACGACAGGGACAGCCTCGTCGAGGCGGTGCGCGCGGTCCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACAGCGACGACGGCGACGACCGCGGCTGCGGCGATGCGACCGAGTGCTGCTGGCGTTGACAAGAAACCGCAGCTGAAACCGCAAAAGCCTTTCACGCCGCCGGGCGGCATACCTGGTCCAAACGGATTGAAAATGTCACCGTTCATGGAGGGTATGCCCCACCTGCCGTTCGGGCCCTTTAACTTCTGGAACCCGACGCCCTTCATGCCCGCCCCGTTTATGGGTGGCGCACCGAACGTGCCGATTCTGCCAGAACAATACTTCGCGTCGCAGAGAATGCGCGGATTACAAGAGCAACAACGAAACGCGGCGATAGTGCAGCAACAACATCAGCCACGAGACCGAGACGGAGTCGGCGTATCCGGAACGGCGGACGCGGCTGGCACTTCGAACTCCCGAAGTGCATCGATGTCGAAAGTGACGCGTGAAATGGCAGAAATCTATGATACGCCCGGGGCAAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACGGGAATTCCAAGGGACCAGCGGGCAATGGCGGAGGCGAGAAACCAGCAGTCGTCGTCGTCGTCGTCGTCGCAGCAGCAACATCCGGAAACGATGAGCAGCAAAGCGCTAATCGACCAGCTCTGCAGAAACTCGAGGAGGACTCCGCTGCCACGGATAGCGCAGGATAGCAGCGAGGACGAAAGTTATCGAGGACCAGCGGGCAGGATAGTGCCTGAGAGGCCAGAGCGCGTGCCCACGGTCGATCTTAGCCCGTCGCCCTCGGAGAGAGGTCGCACGGAAGACGGCAGCGACCGGCTGACGTCACCACCAACACCCTTGTCCATCACCCGTGCGGGCAGCAGGGATGAGGATAGCACCCGTGACTCGCGCAGCAGCAGAGAGCGCGAGGTTCACAACGGCCAGGAGGATCGTGATCGGAAGCAGCCTTTGAGCCTGCAGCAGCAACCGACACAGCTGACTAACCACTACCCAGACATACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAGTACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGACCCGGCGAATCGACTAACAGCCAGCAGCCGGCGTCGGAGCAACGCGGCCCTACGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MSRKSRCNINVFENNDKDCVEVERLNNGRARRRWTSAMGVVIRLERVAEELMGRRRWKQYQDTLYSGTRSSESATAQPHHRLYPALSSSCNQIPGSLDQIGPQLHHPAPSSLPSALXXXXXXXXXXXXXXXXXXXLATGVVKQESLQRHHLQNHHHHLQTPAQDHPQEDSRRLRPAEIKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGRGQNEAEKRLKLDEDADRSVVSPLRTENDRATRDHPTANVTDTEGTKERTEEITLERAPITQGLLRVKKEEELQEVPSSGGGTTILTTPATNSEGTRSRLLCREGNAAATSVAATPFFLGRRASPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSDSSSSSRSAESPMSSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVHTHQDSAAAADQPLDLSAKPGRTTQDTNISLLEQQKIPLRMPAGIDPKSILNSYRAKPRMTGPVAAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELKAALNDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTPPNTTQNASATTPPSQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGSDSLRNLLQRGHEAGTEWPGLEHPNIGPYIQKMLAAAAPMGLETPNYRIPDVVRKLMTEDKRLNKNVNGDQSQPHQQHHHQQHHPLAAHQTQSQQQRTSLSNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPSLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGATGMPSCQPTGVVPPQQVGSMLTDPSPFKRGRYTPPQPPQQQQPQPPQQQSQQQQSKQQAQDANKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTATTAAAAMRPSAAGVDKKPQLKPQKPFTPPGGIPGPNGLKMSPFMEGMPHLPFGPFNFWNPTPFMPAPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAIVQQQHQPRDRDGVGVSGTADAAGTSNSRSASMSKVTREMAEIYDTPGANGSFLDNLIRSSLETGIPRDQRAMAEARNQQSSSSSSSQQQHPETMSSKALIDQLCRNSRRTPLPRIAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSITRAGSRDEDSTRDSRSSREREVHNGQEDRDRKQPLSLQQQPTQLTNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRPGESTNSQQPASEQRGPTLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254708;
- 90% Identity
- iTF_01268180;
- 80% Identity
- -