Pfla020297.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- cnc
- Assembly
- GCA_014825475.1
- Location
- QVNW01000528.1:4148-9944[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3 7.1e+03 -2.5 0.2 19 29 245 255 245 257 0.84 2 2 7.1e-16 8e-13 48.6 8.4 3 65 302 364 300 364 0.96
Sequence Information
- Coding Sequence
- ATGGCGACGATGGGAGTTATTGTATATATTCCAAGCATGTACACCATGCGAATGTTGGACAACGGTAGCAACAATGCGTCCGGACCGACCGGCGCAGCGGCTCTACCTGGTGTGCAAACAGCTGGTGGCACAACTTCGACGGCCACGGGCGTCACGACTTTACCTGGTGTAGCCGACGAAAGAATGGATGCTTCGAGCGATAGCGCCGTGAGTAGTATGGGAAGCGAGCGCGTACCGTCTTTGTCGGACGGCGAGTGGATGGAAACTGGATCCAATTCCAGTCATACTCAGGCGGATTCCCATTACACCATGGATTACGCGAGCAAGTACCGCATGCCATACGACTGCAACTACTCGGTATCCGGGAGAAACGCCGGCTCTCCGAGATGCCAGACGGAACGAACGGTGCCGCCGGTCGCTCAGAAAAAACATCAGATGTTCGCCAAGCGATATTTCCAGGAACAAGGCACTTGCTCACCTTTAGGGGCTACCACACACCCGACCACTCCGATGAAGTACGAATACGACACGCACACGGTCGGCGCGGGTGCACCCGCGAACACGTATTCCGGACCAATCGAGGGTGCAGCCGGGCCGCAGTCAGAAATGAAATATAGTTATAGTGTGGATTTCAGCCGTCATCAATCCGGGCGATCTGCAATAGAACACGTCCATCATAATCACACCTATCATCTACCTGCCGAGAGCTCAGGTTCTCTTCAACGTCCTATTTCCCGTGACAAGAAAGTTCGCAAAACTGATGAAGAGCATCTAACGAGAGATGAGAAGAGAGCAAGAGCGTTAAACGTACCGATCGCAGTCAATGACATCATCAATCTTCCCATGGATGAGTTTAACGAACGTCTCAGTAAATATGATCTCAGCGAAGCCCAACTATCCTTAATACGCGATATTAGAAGACGAGGCAAAAACAAGGTCGCCGCGCAGAATTGTCGTAAACGCAAATTAGATCAAATCATAAGTCTGGCTGACGAAGTTAAAGAGATGCGAGATCGTAAGAACAGGCTTCTTCGCGAGCGCCAATACATGCTCATTGAGAAGCAGCGAGTGAGAGACAAATTTAGTCAGCTTTACCGTCATGTTTTTCAGTCTTTACGAGATCCAGATGGTAATCAGTACCATCCGTACGAATACAGTCTTCAACAGTCTGCGGACGGAAACATTCTGCTAGTTCCCAGAAATCAGACGAATCCGCATCAGTCACATCAATCCTCGATAGAGCCGAAAACGAAACCCGATCCTGAACGCAAGGAATGA
- Protein Sequence
- MATMGVIVYIPSMYTMRMLDNGSNNASGPTGAAALPGVQTAGGTTSTATGVTTLPGVADERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYASKYRMPYDCNYSVSGRNAGSPRCQTERTVPPVAQKKHQMFAKRYFQEQGTCSPLGATTHPTTPMKYEYDTHTVGAGAPANTYSGPIEGAAGPQSEMKYSYSVDFSRHQSGRSAIEHVHHNHTYHLPAESSGSLQRPISRDKKVRKTDEEHLTRDEKRARALNVPIAVNDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKNRLLRERQYMLIEKQRVRDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNILLVPRNQTNPHQSHQSSIEPKTKPDPERKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765287;
- 90% Identity
- iTF_00182393;
- 80% Identity
- -