Pelo012919.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- sre_1
- Assembly
- GCA_014825605.1
- Location
- QVNY01035040.1:591-1910[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 9.1e-14 52.2 5.7 1 32 152 182 152 185 0.96 2 2 1.5e-19 6e-16 59.2 3.2 1 35 315 348 315 349 0.98
Sequence Information
- Coding Sequence
- ATGGCACTGCAGTCGCTCTCTAACAACGACCCTACCCGGCTGTTTTCAATACGCCACCCCACCACGACCAGCCTGTCGATATATGCTCTGGGCGGTCGCACTCCGCTGGAATCTTGCCGGTCGGGTTATCAAGCAGGCGTCTTGGGGATGAGTGAGGATACGCAGTCAGGGGCGCCGTTTGGCCAACATCGCGACCCTGGTGCTGTTCGAACTGCCCTACCGTCGAGGCCCATGTCTTCAAAACCAAGGGATATGGGGAGTCCTCTGCCAGAACAGGCCAAAATCTCAATCGAACGGGGGGATCATGCAAATGCACAGAAAGCCGGAGGTAATATGGCCGGCGCGAATCTTGACATGCTGATTACTAAACCTCTGTTTGCAGCCTTGAATCAAATGGGGAGCGCGAAGAAAGTAAGTCCGCCTCCTGGGGCCAACCACAGTCAGGGGCAAGTGTGCAGCAATTGCGGTACGACTCGAACTCCTTTGTGGAGGCGATCACCTCAAGGTGCAACCATCTGCAACGCCTGCGGCCTGTACTTGAAGGCAAGGAACGCCTCCCGACCGACCAGCTTGAAGAAACCGCCAAACGTTGTCCCCGCGGACGCTGGTCGTGCGACACTCTCCAAAGGCCCCTCGAGTTCAGGCCCCAAAGCCCTGGCTAACGCTGCGACGTATGTCCCGGCCGACCAAACTCCTGTGGGAACTTGTCCTGGCGGTGGTCGGTGTAATGGAACTGGTGGTGCAGAGGGCTGCAATGGCTGCCCTGCGTACAACAACCGTGTGGCCAAAAGCGCCCACCTGAGCGTGTTGCAAAAGCAACAGCAACAGGAACAAAACCAACCGCAAGGCTGCTCAGGCCAAGCCGGTGGTTTGAAAAACGAGCCTACCCCCATCGACGTCAACGCTCTTCAAAATCAAAATGCTTCTGCGGTTGTCATTGCGTGCCAGAACTGTGGCACGACTATTACTCCCCTATGGAGACGAGACGAAAGCGGCCACACAATTTGCAACGCCTGCGGGCTTTACTACAAACTTCATGGAGTTCACAGGCCGGTCACGATGAAAAAATCAACCATCAAACGACGCAAGCGGGTGATTCCCGCTTCGCAGGACGAAGAGATGGAGGATGCGATGGATTCGACCGAAGGTGTCGGCTACGAACAAAATTCAGAGAGGGGCTCTATGAACGAAGACGGATCTATCAACCTT
- Protein Sequence
- MALQSLSNNDPTRLFSIRHPTTTSLSIYALGGRTPLESCRSGYQAGVLGMSEDTQSGAPFGQHRDPGAVRTALPSRPMSSKPRDMGSPLPEQAKISIERGDHANAQKAGGNMAGANLDMLITKPLFAALNQMGSAKKVSPPPGANHSQGQVCSNCGTTRTPLWRRSPQGATICNACGLYLKARNASRPTSLKKPPNVVPADAGRATLSKGPSSSGPKALANAATYVPADQTPVGTCPGGGRCNGTGGAEGCNGCPAYNNRVAKSAHLSVLQKQQQQEQNQPQGCSGQAGGLKNEPTPIDVNALQNQNASAVVIACQNCGTTITPLWRRDESGHTICNACGLYYKLHGVHRPVTMKKSTIKRRKRVIPASQDEEMEDAMDSTEGVGYEQNSERGSMNEDGSINL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -