Basic Information

Insect: Pseudomyrmex elongatus
Gene Symbol: ken
Assembly: GCA_014825605.1
Location: QVNY01017059.1:17871-23495[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.51 1e+02 5.0 2.6 3 23 347 367 345 367 0.91

2 9 0.00037 0.076 14.9 4.3 1 20 373 392 373 395 0.96

3 9 8.8e-05 0.018 16.9 0.7 1 23 400 422 400 422 0.95

4 9 9.2e-05 0.019 16.8 5.4 1 23 428 450 428 450 0.98

5 9 4.3e-05 0.0088 17.9 3.0 1 23 461 483 461 483 0.98

6 9 2.4e-06 0.0005 21.8 5.9 1 23 489 511 489 511 0.98

7 9 2.5e-07 5.1e-05 24.9 0.5 1 23 517 539 517 539 0.98

8 9 8.3e-07 0.00017 23.3 0.2 1 23 545 567 545 567 0.97

9 9 0.00021 0.043 15.7 1.9 2 23 573 594 572 594 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.51	1e+02	5.0	2.6	3	23	347	367	345	367	0.91
2	9	0.00037	0.076	14.9	4.3	1	20	373	392	373	395	0.96
3	9	8.8e-05	0.018	16.9	0.7	1	23	400	422	400	422	0.95
4	9	9.2e-05	0.019	16.8	5.4	1	23	428	450	428	450	0.98
5	9	4.3e-05	0.0088	17.9	3.0	1	23	461	483	461	483	0.98
6	9	2.4e-06	0.0005	21.8	5.9	1	23	489	511	489	511	0.98
7	9	2.5e-07	5.1e-05	24.9	0.5	1	23	517	539	517	539	0.98
8	9	8.3e-07	0.00017	23.3	0.2	1	23	545	567	545	567	0.97
9	9	0.00021	0.043	15.7	1.9	2	23	573	594	572	594	0.95

Sequence Information

Coding Sequence: ATGAATTTGGCAAGTGTTTCTTACACAAATATTTGCCGTGCTTGTATGAAACAAGACGAAAATATGACGCCTATGTATAACGAAAATCTGACTGACAATGAGATTGATGTGTCGTATAAACTGGCGGAGCTTACATCCATCGAGATTGACAAATTTGATGGAATGCCCAATATGCTCTGCTCTGAGTGTATAAACTATACTAATATGTTGTATAACTTCAAACTACAAGTGCAAGAATCAGATAAAACACTTAGAATGATGCTTCAAGATCAAAAGAAAGACTTGAATGAAAGAGACGATAAAGAAGACATTAAAATAAATAAAGTCTTTGAAATGAGCATTGATAAATCCACATGTAATGCTCGTATTTCTTCAGATAATCATGCAGGCAAAATAACAATAAAAGAAGCAGGAAACGAGCAACTGGATGACTTCGTTATATATCAAGTGTGTGATGATAAAAACAAGAGTAACCTGCAGTTGGAAAATATTTACGACTTTGTAGAGAAAGTTAGAGAAGGCAAGATAGATGTACAATTTGTAAAAAACGAAATACCCGCAGAAATTTCCAAATTACTCGGGTCACAAGATATTGCAATAATGTACGTACCAAGTTCGCCAGTACCTCATTTTCAACAAAACGAAATGAAAAGTAACAGTGACGTATTTGACTCAATAGTAAAAATAAAAAATGAACAAAAAAGTGACGCAGAGAGTCCGATAAAATCTAGTTTAGTCAGAGAGGAAAATTCTAAATGTTCTTCTTTGAAACAAGATGAAAAGACAATGCACATTGATGGCGATATTGAACAATCTGGGAATGCAAACGACAGTAGTGATTCCGATTCCGATTATTTGATTGGCACCGAAGATAATATATTAGGTAGTGTAAATGATGTAGTTACGCGAATAAAGGAGATAAAGCACGAGAACGTAATAGAGTACCAGTGTACATTATGTATGGAAAGTCACAACGAGCTGTCAAATGTGTTATTGCACATTGTCCATAACCACGTTCCCAGAAGAGGTCCGTTTTTCTGTATATTGTGCGAAAAAGATTGCGACAGCTTTCGTGAGCTGCGAACGCATGTGAAAACGCACACTGGAGCGTGTCCATATTCCTGCTTTATGTGCGAAAAGGCATATTCCAGAAAGCGATACTTGAAAAGACATATGGTGTGCCACGATCTCCCGCGGTATCGCTGCCAAAAGTGCGGTCAGCGCTTCAAGACCAAGCCGGAACTGGACTCCCATGCAGTGTCACATGTAGGCAATGCACCTTTTACCTGCAGTCAATGCTCGCGTGTATTTAATTACAAAGCCCATTACAAGCGACATCTTACCACTCATTTGGATCCACAGGGTCTTTACATACCTAAGTATCCATGTAAACATTGCGAGAAACGCTTTCTTAATAATCGAACACTGGAAACGCACATGCGCGTCCACACTGGCGAGAAACCGTTTAGTTGTGAACACTGCAAAAAATGCTTCTCGCAAAAAGGCAATCTGTTGAATCACATTAAGTTGCACGTTAATCCGCGCAACTATACATGTGAAATATGTGGTAAACGGTTCAATCAACTCTCCACGCTAAAGGATCATATTTTATTACACACAGGTGAGAAACCTTATGTGTGTAATATGTGTGGAAAGGCGTTTACGGTCAGTGCAGCACTGAGAAGACATATATACTATCACATAGGCAAACCACTGCAATGTGAGTGTTGTGACATGAAATTTATCGGTAAATATGATCTGCGACGTCATATGCGGGTGCACGAGAATAAACACAGGACGAAATGCAGTCCAAAGAAATGTAAAACCAAACCAAAGCCAAATAATCTGAAGGAATTAAAGGAAGAGTTAAAGGAAGAAACTGTCAGTGTAATAGAAGATGCGAATGAAGAGGCTGTTTTGTTTGAAAAAAAAAAGATCGATGTTGCAAAGTTAAAGATTATAAGTGGAAAAGTAATTTTCAGCGCTGAAGACATCAGATGCAGCGATAGCAGGGATGAATTCAGATGA
Protein Sequence: MNLASVSYTNICRACMKQDENMTPMYNENLTDNEIDVSYKLAELTSIEIDKFDGMPNMLCSECINYTNMLYNFKLQVQESDKTLRMMLQDQKKDLNERDDKEDIKINKVFEMSIDKSTCNARISSDNHAGKITIKEAGNEQLDDFVIYQVCDDKNKSNLQLENIYDFVEKVREGKIDVQFVKNEIPAEISKLLGSQDIAIMYVPSSPVPHFQQNEMKSNSDVFDSIVKIKNEQKSDAESPIKSSLVREENSKCSSLKQDEKTMHIDGDIEQSGNANDSSDSDSDYLIGTEDNILGSVNDVVTRIKEIKHENVIEYQCTLCMESHNELSNVLLHIVHNHVPRRGPFFCILCEKDCDSFRELRTHVKTHTGACPYSCFMCEKAYSRKRYLKRHMVCHDLPRYRCQKCGQRFKTKPELDSHAVSHVGNAPFTCSQCSRVFNYKAHYKRHLTTHLDPQGLYIPKYPCKHCEKRFLNNRTLETHMRVHTGEKPFSCEHCKKCFSQKGNLLNHIKLHVNPRNYTCEICGKRFNQLSTLKDHILLHTGEKPYVCNMCGKAFTVSAALRRHIYYHIGKPLQCECCDMKFIGKYDLRRHMRVHENKHRTKCSPKKCKTKPKPNNLKELKEELKEETVSVIEDANEEAVLFEKKKIDVAKLKIISGKVIFSAEDIRCSDSRDEFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267759;
90% Identity: iTF_01267759;
80% Identity: -