Pelo010781.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- clz9
- Assembly
- GCA_014825605.1
- Location
- QVNY01014232.1:1456-2880[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-11 8.8e-08 33.2 0.0 1 38 10 47 10 51 0.94
Sequence Information
- Coding Sequence
- ATGCCAAAGGTAGATAAAAAAAAATATACTCAAGAAGATATAAATGCTGCTCTAAAACATATAAACAAGGGTATGTCATTAAGAGAGGCAACAAAAATGTATAAAATACCGAAAAGCACACTTTATTGCAAAGCAAAAAATATCTATCCTGTCGAATGTTCTAAAGGCCCACCAACTATTTTAACGAAGGAAGAAGAATCACAAATAACAGAATGGATAATTTACTGCTGCGATAGAGGTTTCCCAGTTAGTAAAAATCAACTCCTCGATACTGTGCATTCATTAATACTTGAATTAGGAAGAAAAACGCCTTTTACAAATAACAGGCCCGGTAGACACTGGTACGAAGGTTTCTGTAGACGTCATCCTGAATTATCCATCAGAGTAGCTCAAAATTTGACACGTACACGTGCTTCAGCTACAGAGAATGTTTTAAAAAATTGGTTCGCTGAAGTGCACGAACATTTACAAAAAAGAAATCTTGTTGAAATTGATTCATCCAGGATATTTAACTGTGATGAGAGTGCATTTTTTCTTTGCCCCAAAGCTGATCAAGTTATTGCAAAAAGAGGATCAAAATCAGTTTATAAAGTTATTGACGGAGACGAGAAAGAAAGTTTAACAGCACTTTTTATGGTAAATGCTAAAGGAGAAATGGCTCCACCAATGATTTTATATTGGTACAAGCGAATGCCATACAGTGTTATACATAAAATTCCTTCTGGATGGAGTGTTGGTTCAACGGAAAAAGGATGGATGACAGCCGAGTCATTCTACGAGTATATAACAAATGTGTTTTATCCATGGCTAGTAGCTAGAAAGATTACAATGCCTATAGTCTTATATGTAGATGGTCACTCATCTCATTTAACTATGCCATTAAGTGTCTTTTGCCGTCAAAATGGAATTGAACTTGTAGCATTGTATCCGAATGCGACTCATATACTCCAACCTTTAGATGTCTCAGTATTTCATCCTCTAAAACAATCCTGGAAGAAGACAGTAGATAAATGGAGATTAGATAATGCTCCTCAGCGTGTGCGAAAAGACAATTTTGCTTCATTATTAAAACAAGCAGTGGATTCTATAAATTTAGCTGAAATAGTTCAAAATGGATTTAAGACTTGCGGTTTGTGGCTCTTTTCAGCAGAGGCTATAAATTATAACATTCTAAACAAAAATAAAAAACAAGAACAGATGCTTGAACAACAGAGTGATAATTCCATTCATGAATTAAACAGTTATAAAGAAGATTGCAAGAAACACTTAAAATTTTTTGAAAACCACATTAGCAATGATTTGTTACATAAATTTAAAGATGCAGAGATCGATGGCTCTCCAAGTGTATTTATTGATATAAAAAATGAAGGATTATATGAGTATTGGAAAATGATAAAAGGATTATGTGGTACATTAGATATCTAA
- Protein Sequence
- MPKVDKKKYTQEDINAALKHINKGMSLREATKMYKIPKSTLYCKAKNIYPVECSKGPPTILTKEEESQITEWIIYCCDRGFPVSKNQLLDTVHSLILELGRKTPFTNNRPGRHWYEGFCRRHPELSIRVAQNLTRTRASATENVLKNWFAEVHEHLQKRNLVEIDSSRIFNCDESAFFLCPKADQVIAKRGSKSVYKVIDGDEKESLTALFMVNAKGEMAPPMILYWYKRMPYSVIHKIPSGWSVGSTEKGWMTAESFYEYITNVFYPWLVARKITMPIVLYVDGHSSHLTMPLSVFCRQNGIELVALYPNATHILQPLDVSVFHPLKQSWKKTVDKWRLDNAPQRVRKDNFASLLKQAVDSINLAEIVQNGFKTCGLWLFSAEAINYNILNKNKKQEQMLEQQSDNSIHELNSYKEDCKKHLKFFENHISNDLLHKFKDAEIDGSPSVFIDIKNEGLYEYWKMIKGLCGTLDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729221;
- 90% Identity
- iTF_01269720;
- 80% Identity
- -