Pelo042699.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014825605.1
- Location
- QVNY01025159.1:24091-45499[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 3.9e-14 53.5 0.1 1 45 569 614 569 614 0.96 2 2 2.1e-17 4.1e-14 53.4 0.0 1 43 994 1037 994 1039 0.94
Sequence Information
- Coding Sequence
- ATGTCGCGCAAGAGTCGCTGCAACATTAATGTTTTCGAAAATAACGATAAGGACTGCGTGGAAGTAGAGCGTTTAAATAATGGCCGTGCACGTCGGCGATGGACTAGCGCGATGGGCGTCGTCATTCGTCTGGAACGGGTAGCAGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCAGCGACTGCACAGCCCCACCATCGGCTTTACCCGGCGTTGTCGTCGTCTTGCAACCAGATACCCGGGAGCCTGGACCAGATTGGGCCGCAGCTACATCACCCGGCACCCTCGTCGTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGCGACCGGTGTGGTGAAGCAGGAGAGCCTGCAGAGGCATCACCTGCAAAACCACCATCACCATCTGCAAACGCCGGCTCAGGATCATCCGCAGCAGCAGGAGGATTCGCGTCGTCTGAGGCCGGCCGAGATCAAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGACAGGACGTGGCCAGAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGTGGTCAGCCCTCTAAGGACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGGACGGAGGAAATTACGTTGGAGCGGGCACCGGTAACGCAGGGCTTGCTGAGGGTAAAAAAGGAAGAGGAGCTGCAGGAAGTGCCGAGTTCTGGTGGCGGCACGACGATACTGACGACGCCGGCGACGGACTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGAAGGGAACGCGGCCGCAACGAGCGTCGCCGCGACGCCGTTTTTCCTCGGAAGACGCGCGAGTCCACCACCGGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGCCTCGATGGCAAGCTACCCCACGACGACCAGGCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCCATGTCGTCGGTTCAGGTGGACCCCATGGCGGCGTCCGTGGTCGCTGCCGCCCTCAGCGGCACTTATCCCACCTTACTACCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTCGGGGTGCATACCCACCAGGACAGCGCCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCGGAAGAACAACTCAGGACACGAACATATCTCTACTGGAGCAACAGAAAATACCTCTGAGGATGCCGGCAGGCATCGATCCCAAGAGCATCCTCAACTCGTACCGCGCGAAACCGCGAATGACCGGACCGGTTGCGGCCGCGGCGGCGGCGGCGGCGGCTGCGGCTGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGAACTTATACCGAGGAGGAGCTGAAGGCCGCCCTCAATGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCTCGTAGCACCCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGAATCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACCACTACTACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAACTATCCGGCGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTGAAACCTTTGCTGTCGTTGGAGGATCTCGTGAGGTTCTCCGCGCTCGAAGGAACCGGCAGCGATTCCCTTAGGAACCTGCTGCAACGGGGTCACGAGGCGGGAACCGAATGGCCGGGATTGGAACACCCGAACATCGGTCCTTACATTCAGAAGATGTTGGCTGCCGCCGCACCAATGGGCTTAGAGACGCCGAACTATCGCATACCGGACGTGGTGAGAAAGCTGATGACCGAAGACAAGAGGCTGAACAAAAATGTGAACGGTGATCAGTCGCAACCGCATCAACAGCATCATCATCAGCAACACCATCCTCTCGCGGCGCATCAGACGCAGTCACAGCAACAGCGTACGTCCCTGTCGAACGACGACTTCAATCCTAACATCGAGGAGGAGGCCAGCGACAGTGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGTACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCATTTGCTCAGGGCTTCGCGACTGCAGCCTCGAGTCCGAGTCTTTTAGAGCGAGCCAGTCCAGCGTTCTCCGGCACCAGCAGCCCTACAAACTCACTGGTTGGCAAAGCGGTAGCCGTTAACTTCCGCGACGTTATTGCCAAGAGCATAAGCGTTAAGTTCCAAGAGGGCCAGACGCCTGGCGCGGCTGGCATGCCAAGTTGCCAACCGGCCGGCGTTGTTCCACCTCAGCAGGTTGGCAGCATGTTGACCGATCCGAGTCCGTTCAAAAGGGGCCGTTATACGCCCCCGCAACCGCCACAACAGCAACCGCCGCAGCAATCGCAACAGCAGCAGTCTAAACAACAGGCGCAGGATGCGAATAAACCGAAGCCGGGTACAGGCGGCAAGGGCACCAGGCCGAAACGCGGCAAGTACAGAAACTACGACAGGGACAGCCTCGTCGAGGCGGTGCGCGCGGTCCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAAACAGCGACGACGGCGACGACCGCGGCTGCGGCGATGCGACCGAGTGCTGCTGGCGTTGACAAAAAACCGCAGCTGAAACCGCAAAAGCCTTTCACGCCGCCGGGCGGCATACCTGGTCCAAACGGATTGAAAATGTCACCGTTCATGGAGGGTATGCCCCACCTGCCGTTCGGGCCCTTTAACTTCTGGAACCCGACGCCCTTCATGCCCGCCCCGTTTATGGGTGGCGCACCGAACGTGCCGATTCTGCCAGAACAATATTTCGCGTCGCAGAGAATGCGCGGATTGCAAGAACAACAACGAAACGCGGCGATAGTGCAGCAGCAACATCAGCCACGAGACCGAGACGGAGTCGGCGTATCCGGAACGGCGGACGCGGCTGGCACTTCGAACTCCCGAAGTGCATCGATGTCGAAAGTGACGCGCGAAATGGCAGAGATCTACGATACGCCCGGGGCGAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACGGGCATTCCAAGGGACCAGCGGGCGATGGCGGAGGCGAGAACCCAGCAGTCGTCGTCGTCGCAGCAGCAACACCCGGAAACGATGAGCAGCAAAGCGCTGATCGACCAGCTCTGCAGAAACTCGAGGAGAACTCCGCTGCCGCGAATGGCGCAGGATAGCAGCGAGGACGAAAGTTATCGAGGACCAGCGGGCAGGATAGTGCCTGAGAGGCCAGAGCGCGTGCCCACGGTCGATCTTAGCCCGTCGCCCTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCACCAACACCCTTGTCCATCACCCGTGCGGGCAGCAGGGATGAGGATAGCACCCGTGACTCGCGCAGCAGCAGAGAGCGCGAGGTTCACAACGGCCAGGAGGATCGTGATCGGAAGCAGTCTTTGAGCCTGCAGCAGCAACCGACACAGCTGACTAACCACTACCCAGACATACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAGTACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGACCCGGCGAATCGACTAACAGCCAGCAGCCGGCGTCGGAGCAACGCGGCCCCACGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MSRKSRCNINVFENNDKDCVEVERLNNGRARRRWTSAMGVVIRLERVAEELMGRRRWKQYQDTLYSGTRSSESATAQPHHRLYPALSSSCNQIPGSLDQIGPQLHHPAPSSLXXXXXXXXXXXXXXXXXXXXXXXLATGVVKQESLQRHHLQNHHHHLQTPAQDHPQQQEDSRRLRPAEIKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGRGQNEAEKRLKLDEDADRSVVSPLRTENDRATRDHPTANATDTEGTKERTEEITLERAPVTQGLLRVKKEEELQEVPSSGGGTTILTTPATDSEGTRSGLLCREGNAAATSVAATPFFLGRRASPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSDSSSSSRSAESPMSSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVHTHQDSAAAADQPLDLSAKPGRTTQDTNISLLEQQKIPLRMPAGIDPKSILNSYRAKPRMTGPVAAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELKAALNDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESLTSTHSHPHEPGAPATTTTTITTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGSDSLRNLLQRGHEAGTEWPGLEHPNIGPYIQKMLAAAAPMGLETPNYRIPDVVRKLMTEDKRLNKNVNGDQSQPHQQHHHQQHHPLAAHQTQSQQQRTSLSNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPSLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPSCQPAGVVPPQQVGSMLTDPSPFKRGRYTPPQPPQQQPPQQSQQQQSKQQAQDANKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTATTAAAAMRPSAAGVDKKPQLKPQKPFTPPGGIPGPNGLKMSPFMEGMPHLPFGPFNFWNPTPFMPAPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAIVQQQHQPRDRDGVGVSGTADAAGTSNSRSASMSKVTREMAEIYDTPGANGSFLDNLIRSSLETGIPRDQRAMAEARTQQSSSSQQQHPETMSSKALIDQLCRNSRRTPLPRMAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSITRAGSRDEDSTRDSRSSREREVHNGQEDRDRKQSLSLQQQPTQLTNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRPGESTNSQQPASEQRGPTLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254708;
- 90% Identity
- iTF_01268180;
- 80% Identity
- -