Pelo039659.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- -
- Assembly
- GCA_014825605.1
- Location
- QVNY01030560.1:1-1602[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5 4.3e+04 -3.6 0.0 57 86 90 116 86 117 0.61 2 2 1.5e-13 6.8e-10 40.6 0.0 2 88 273 354 272 355 0.90
Sequence Information
- Coding Sequence
- ATGCGCGAGAAGGACGCTGACATGCTCATCATCGACCACTTGAAGAAGATCGAGCCGACGGGATATTCATGGAAGTTCATCACCGAGTCTGTCATGAACGGCATTATGCAGGTCGAGGACAAGTACTTCTATGACCACGAAACACCTGTTGTGCGGCCGGCCGCCGACGGTGGACCGGGGAAGGGGACGCGGACGCCATTCACCAAAATGGAGGATGCTTTGCTGGCCCGATGGGTTCTGGACCATCCGCAAGGCCGCAAGGGGAATAATATCTTCCAGGAATTTGGGCAGACGCATCCTAGCCACACCTGGCAGTCATGGCGGAACCGGTATGTCAAGACTTTGAATCCCCTACCCATGGAACAGTTATTTCAGTTAGCTGCCTCGGCATCTTTGGAGATCGCGGATGTGCGGGCAAACGGGAATACTCAGGCGGATCCGGTTCCGGTTCCCAAACCTACACGTACGCCGCTCCCGACGTCCAAGCCGGACCGGGCAGAGGACTCAGAACAAAGGACAGAGCCGCCAACTATTACACCGGACCAACCTGATAAAGAAACCAGACAGCAGGAAGAGCCAAAAGAAATGGAAGAAGCCAGGGAAACCAGAGGAGACGATGACCCCTCGGACGAGGAGCCTTACGAGCCTCGTGAGAACGGCGTCCCAGCGGAAGACGAGTCTCGGGAAGAAGAAACTATCAAGGATCAGACCCAAGAACCACCCCATCCATCAAATCCTACCGAATATGGTCAAGAATCTCACGCAATTGTTGCCCCTGACGCCCAAGAAATCGAAGACCCCGAGGACGAGCTCAGAAAGCAAGAATTCTACGCTGACTTATATGAGTTTGTCATCCAACGGCACGTGGACATTAAGCGACGCCCAAAAATTCACGACAGACTCATCGAACTTTGGGATCTCAACCAGGCGGTGGATGTGCAGGAAATGCCATATGATGAAGTGGACTGGGAAATCGTGGCCGAAGATCTAGGCTACGAAAACGAGAGTCATGCTGCGGCGCCACTCCTCGAGGAATGCTATCGCGATAACCTTAAGGAGTTTCTCGACGAAGTCATGGATTTCGATGTCAACAGAGATGAGCAGCCAGCCGCTGATGAGCGTGATCTCGGCCATGAAGAGATTGCTGAAGAAGAGGTGGAGGAAGTGACGGGGTTGGGGGTTATCCAGAGCGAAATCACCGACTTTCAAGCCACCACCCAGCGCAATATCTCGAGATCGCCAGGGAGCTACGTCCCATCATCGCCACCCTTGGGGTTTCTGGGCAAAAAGCGACCCCTGCCTAACCGCTTTCCGTCCTCGTCCGGTCCCTCGACGAAGCGCAGGCGCTTTAGCAGAAACGCCGAGATACCATCCACGCCCGAGGAGAAGATTCGCGTCATTCGAGACTATCCCTCTACACAGAAAGGCTCACCCAGCTTTCGCCGGAATCTTATCAAGGGTGACTACGTCGATATGAGCGAGGCGTCGCAACACTTGCCGCCCCTGCCAGCCCCCTTGGATGAAGATGAGGAGGAGGAGGAGGAGGGCGA
- Protein Sequence
- MREKDADMLIIDHLKKIEPTGYSWKFITESVMNGIMQVEDKYFYDHETPVVRPAADGGPGKGTRTPFTKMEDALLARWVLDHPQGRKGNNIFQEFGQTHPSHTWQSWRNRYVKTLNPLPMEQLFQLAASASLEIADVRANGNTQADPVPVPKPTRTPLPTSKPDRAEDSEQRTEPPTITPDQPDKETRQQEEPKEMEEARETRGDDDPSDEEPYEPRENGVPAEDESREEETIKDQTQEPPHPSNPTEYGQESHAIVAPDAQEIEDPEDELRKQEFYADLYEFVIQRHVDIKRRPKIHDRLIELWDLNQAVDVQEMPYDEVDWEIVAEDLGYENESHAAAPLLEECYRDNLKEFLDEVMDFDVNRDEQPAADERDLGHEEIAEEEVEEVTGLGVIQSEITDFQATTQRNISRSPGSYVPSSPPLGFLGKKRPLPNRFPSSSGPSTKRRRFSRNAEIPSTPEEKIRVIRDYPSTQKGSPSFRRNLIKGDYVDMSEASQHLPPLPAPLDEDEEEEEEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -