Pelo027299.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- pcr1
- Assembly
- GCA_014825605.1
- Location
- QVNY01027024.1:532-1674[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-17 1.7e-13 51.8 3.2 2 65 200 263 199 263 0.96 2 2 2.9 4.9e+03 -1.0 0.1 18 33 265 280 264 290 0.87
Sequence Information
- Coding Sequence
- ATGGATAACTGGAACCAAATCCACGGCAACAATCTTGACGACTTGCAACAGAGGGACGGAATCAGTATGGCCAACAAACCAGCATTCGTCCGCCCCAATCCCCAAGTCGGACAGGCAGTATTGAGTGATGGAAACATCATGATTGATCCAATGCTGCAGTCTATGGCACCGGCGGATGCTTCAATCTATTCGGCTATTCCAGTTTCGGTCACTGATGAGCGTTACATGACCAATCCGATTTCGAACCCCGGCCATATGGCCATATACAATGGTGGCGACATGTACCTTTCAATGCCTGAAGTCGGGAATGGAGATATGGGTTATGCGGAGCCGTCGGATGCTGCGACCTCATCGAATGCCACAAGTCAGACCAGATCGATATCGCCCTCCTCAGAGGGATACTATCGGAAAGCCTCTGCTTCTAGTAGGTCTTCGGTTCCTTCCCTGGCGGCGCTTCCGGAGAAGAAACCACACACTACAAAGCAACGTAGCACTCGTCAGACAAAAGAATCTACTGCTTCGGCGCCAAAACGACAATCCAAGCAGAAGGTCCAGGTGGCCAAACAGGAGGCAGTCGATGACTTTGGCCCAGAAGATGACACGAAGCGCAATAGATTCTTGGAAAGAAACAGAATTGCCGCCTCCAAGTGCCGCAAGAAGAAGAAGGAATGGGTCAATGATCTCGAGGAAACAAAGCTGGGCCTGGAAACACAAAATGCGAACCTGCACTCGGAATATAACGGCCTCGTGAACGAATTGAGCCGCATCAAAACGGAGCTGATGAACCACGCCAGCTGCAAAGACGCCAAGATTGATTCTTGGTTGGACCTGGAAGCTCGAAAATTTGTGCAGAAAGCGGCAGAGCAGCAACCCCAGACGCAGGCTGTCGGGATGTCGCAGCACCGTGTACGCGCTTACTCTGATGCCGGATCAAGCATAAACATCTCCCCGACAACATCGACTGTTCCCTTACCCCTGTCGCCCAAGTCTCAGGGTAATGCCGAACTCAACTATGACCACATGCCAGATGACATGTTCGATCAATAA
- Protein Sequence
- MDNWNQIHGNNLDDLQQRDGISMANKPAFVRPNPQVGQAVLSDGNIMIDPMLQSMAPADASIYSAIPVSVTDERYMTNPISNPGHMAIYNGGDMYLSMPEVGNGDMGYAEPSDAATSSNATSQTRSISPSSEGYYRKASASSRSSVPSLAALPEKKPHTTKQRSTRQTKESTASAPKRQSKQKVQVAKQEAVDDFGPEDDTKRNRFLERNRIAASKCRKKKKEWVNDLEETKLGLETQNANLHSEYNGLVNELSRIKTELMNHASCKDAKIDSWLDLEARKFVQKAAEQQPQTQAVGMSQHRVRAYSDAGSSINISPTTSTVPLPLSPKSQGNAELNYDHMPDDMFDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -