Pden012321.1
Basic Information
- Insect
- Pseudomyrmex dendroicus
- Gene Symbol
- dnajc2
- Assembly
- GCA_014825645.1
- Location
- QVNZ01003688.1:20747-22736[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-05 0.15 12.7 0.0 3 31 403 435 401 451 0.85 2 2 3.6e-13 5.8e-10 39.6 0.0 3 44 522 567 520 569 0.92
Sequence Information
- Coding Sequence
- ATGCAAATTTTCCGCAATTTTATTACACATAATGATATCTCAGAATCATCAGATGAAGAGGAGGATTTATCTCAATATCAATTTGAAGATGATCTTGAGTATCTCAGATCGCTCAATCCTAGAGATTGGAAAGATCAGGATCATTATGCTGTTTTAGGCTTGAAAAGTCTTAGGCACAGAGCAACAGAAGATCTCATCAAAAGAGCATATAAACAGAAAATTCTGAAACATCATCCTGATAAACGTAAGGCAATGGGTGAAGAAATTCGATCGGATGATGACTATTTCACATGCATAACTCGTGCTTGGGAAACTCTTGGAAATCAGGCCAAGAGACGAAGCTACGACAGTGTGGATCCTTATTTCAACGACAGTCTGCCTGATGAGAAGGATTGTCGGAGTAATTTCTACGAGGTGTTAGGTAAAACGTTTAAGGAAAACTCACGATGGTCCGTGAAGAAACCTGTACCGCAATTAGGCGGGCCGTATATGCCGAGAGAAAAAGTGGAGAAATTTTATTCGTTCTGGTATGATTTCGATTCCTGGCGTGAATATTCGTATCTTGATGAGGAGGACAAGGAGAGTGGTCAAGACCGGGACATGCGCAAATGGATCGAGAAGAAGAATAAAGCTACGAGAGCGAAACGGAAAAAGGAGGAGATGGCGCGAATACGTTCTTTAGTGGATATGGCTTACAATATAGATCCTAGAATTAAAAAATTCCAACAGGAAGACAAGGATAAAAAGAACGCAATGAAGAGAGCGAAACAGGAGGCGGCAAAAGCTAGGCAGCAAGAAGAAGAAAGAATAGCTCGGAATGCGGCAGAGAAAGAGAGATTAGAGAAAGAGAAGAGAGAATCCGAAGAGAGAGCAAAGCAGGATGCTTTGAAACAAGAACGAGAGGCGCAGAAAAAGGCGTTGCGCAAGGAAAGGAAGGCGCTCAGAGATTTTTGTAAAGCAAACAATTACTTTGCCGAGAACTCGACCGAAAGTCTTCGTCATATGGAAAGTGTAGAAAAGATTTGCGAACTGTTTAAATTGATTCAGCTTGAGGAAGCGATGAAGAGATTGCAGACTGATGGCAGAAACGCGTTTTTGAGTATCGTCGAAGAAACGGAACGTAAGATCGAAGAGGAACGTCGTGTGAACGTTGCTAACAACGATCCAAAAAGCACGCTCGACAAGCAAACCAAAACCTGCACTGCTCCCTGGAGCGAAAACGATTTACAGCTGTTAATAAAAGCTGTCAATCTCTTTCCCGCTGGTACAAATCAACGTTGGGAAGTAGTAGCGAATTTTATCAATCAACACAACAATTCCACCAACGGAGTCATTCGCGATGCCAAGGAAGTTCTCGCCAAAGCCAAGAGTTTGCAATCGACAGACTTTAGCAAATCGAGTCTGAAAGAACAAGCGAATAAGAAGGCCTTCGATAACTTTATTGCCGAGAAGAAAACGAAGGATGCGGTCGAAGAAAGAATGCCGGCCGTTACGGAACGCTTGGATCATCCGATAGCTAACGGTGTCGCCGTCGAACCGAAAGAAGTAAAAAAGGAATCGACGCCGTGGACGCCAGGAGAACAGAAACTCCTAGAACAAGCGTTGAAAACCTATCCAACCACGGTTTCAGACAGATGGGACCAAATCGCAGCATGTATACCGACGAGAACAAAAAAGGAATGCATGAGGAGATACAAGGAATTGGTAGAACTCGTAAAAGCAAAGAAAGCTGCGCAAGTGTCAAAATAA
- Protein Sequence
- MQIFRNFITHNDISESSDEEEDLSQYQFEDDLEYLRSLNPRDWKDQDHYAVLGLKSLRHRATEDLIKRAYKQKILKHHPDKRKAMGEEIRSDDDYFTCITRAWETLGNQAKRRSYDSVDPYFNDSLPDEKDCRSNFYEVLGKTFKENSRWSVKKPVPQLGGPYMPREKVEKFYSFWYDFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMARIRSLVDMAYNIDPRIKKFQQEDKDKKNAMKRAKQEAAKARQQEEERIARNAAEKERLEKEKRESEERAKQDALKQEREAQKKALRKERKALRDFCKANNYFAENSTESLRHMESVEKICELFKLIQLEEAMKRLQTDGRNAFLSIVEETERKIEEERRVNVANNDPKSTLDKQTKTCTAPWSENDLQLLIKAVNLFPAGTNQRWEVVANFINQHNNSTNGVIRDAKEVLAKAKSLQSTDFSKSSLKEQANKKAFDNFIAEKKTKDAVEERMPAVTERLDHPIANGVAVEPKEVKKESTPWTPGEQKLLEQALKTYPTTVSDRWDQIAACIPTRTKKECMRRYKELVELVKAKKAAQVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733895;
- 90% Identity
- iTF_01269730;
- 80% Identity
- -