Pden012846.1
Basic Information
- Insect
- Pseudomyrmex dendroicus
- Gene Symbol
- cnc
- Assembly
- GCA_014825645.1
- Location
- QVNZ01001011.1:78295-84066[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 5.9e+03 -2.1 0.2 19 29 240 250 240 257 0.78 2 2 8.3e-16 8.7e-13 48.6 8.4 3 65 297 359 295 359 0.96
Sequence Information
- Coding Sequence
- ATGGCGACGATGGGAGTTATTGTGTATATTCCAAGCATGTACACCATGCGAATGTTGGACAACGGTAGCAACAATGCGTCCGGACCGACCGGCGCGGCGGCTCTACCTGGTGTGCAAACAGCTGGTGGCACAACTTCGACGGCCACGGGCGTCACGACTTTACCTGGTGTAGCCGACGAAAGAATGGATGCTTCAAGCGATAGCGCCGTGAGTAGCATGGGAAGCGAGCGCGTACCGTCTCTGTCGGACGGCGAGTGGATGGAAACTGGATCCAATTCCAGTCATACTCAGGCGGACTCCCATTACACCATGGATTACGCGAACAAGTATCGCATGTCATACGACTGCAACTACTCGGTATCCGGGAGAAACGCTGGCTCTCCGAGATGTCAGACGGAACGAACGGTACCGCCGGTCGCTCAGAAGAAACATCAGATGTTCGCCAAGCGATATTTCCAGGAACAAGGCACTTGCTCACCTTTAGGGGCTACCACACACCCGACCACTCCGATGAAGTACGAATACGACACGCACACGGTCGGCGCGGGTGCACCCGCGAACACGTATTCCGGACCAATCGAGGGTGCAGCCGGGCCGCAGTCAGAAATGAAATATAGTTATAGCGTGGATTTCAGCCGTCATCAATCCGAACATGTCCATCATAATCACACCTATCATTTACCTGCCGAGAGCTCAGGTTCTCTTCAACGTCCTATTTCCCGTGACAAGAAAGTTCGCAAAACCGAAGAAGAACATCTAACGAGAGATGAGAAGAGAGCAAGAGCGTTAAACGTACCGATCGCAGTCAATGACATCATCAATCTTCCCATGGATGAGTTTAACGAACGTCTCAGTAAATATGATCTCAGTGAAGCCCAACTATCCTTAATACGTGACATTAGAAGACGAGGCAAAAACAAGGTCGCCGCGCAGAATTGTCGTAAACGTAAATTAGATCAAATCATAAGTCTGGCTGACGAAGTGAAAGAGATGCGAGATCGTAAGAACAGGCTTCTCCGCGAGCGCCAATACATGCTCATTGAAAAGCAGCGAGTGAGAGACAAATTTAGTCAGCTTTACCGTCATGTTTTTCAGTCTTTACGAGATCCAGATGGTAATCAATATCATCCGTACGAATACAGTCTTCAACAGTCTGCGGACGGAAACATTCTGCTAGTTCCCAGAAATCAGACGAATCCGCACCAGTCACATCAGTCTTCGATAGAGCCGAAGACGAAACCCGATCCTGAGCGCAAAGAATGA
- Protein Sequence
- MATMGVIVYIPSMYTMRMLDNGSNNASGPTGAAALPGVQTAGGTTSTATGVTTLPGVADERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYANKYRMSYDCNYSVSGRNAGSPRCQTERTVPPVAQKKHQMFAKRYFQEQGTCSPLGATTHPTTPMKYEYDTHTVGAGAPANTYSGPIEGAAGPQSEMKYSYSVDFSRHQSEHVHHNHTYHLPAESSGSLQRPISRDKKVRKTEEEHLTRDEKRARALNVPIAVNDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKNRLLRERQYMLIEKQRVRDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNILLVPRNQTNPHQSHQSSIEPKTKPDPERKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765287;
- 90% Identity
- iTF_00182393;
- 80% Identity
- -