Basic Information

Insect: Pseudomyrmex cubaensis
Gene Symbol: Zfy1_1
Assembly: GCA_014825685.1
Location: QVOA01000382.1:1-2478[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.022 2.4 9.2 1.0 2 23 104 125 103 125 0.95

2 8 0.00081 0.088 13.7 0.7 1 23 234 256 234 256 0.98

3 8 0.014 1.5 9.8 0.3 1 23 335 357 335 357 0.97

4 8 1.1e-05 0.0012 19.6 0.6 1 23 363 385 363 385 0.97

5 8 0.0021 0.23 12.4 2.6 1 23 449 471 449 471 0.97

6 8 0.00032 0.035 15.0 1.5 1 23 477 499 477 499 0.99

7 8 0.34 37 5.4 1.6 2 23 598 619 597 619 0.97

8 8 1.1 1.2e+02 3.9 0.0 3 23 628 648 627 648 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.022	2.4	9.2	1.0	2	23	104	125	103	125	0.95
2	8	0.00081	0.088	13.7	0.7	1	23	234	256	234	256	0.98
3	8	0.014	1.5	9.8	0.3	1	23	335	357	335	357	0.97
4	8	1.1e-05	0.0012	19.6	0.6	1	23	363	385	363	385	0.97
5	8	0.0021	0.23	12.4	2.6	1	23	449	471	449	471	0.97
6	8	0.00032	0.035	15.0	1.5	1	23	477	499	477	499	0.99
7	8	0.34	37	5.4	1.6	2	23	598	619	597	619	0.97
8	8	1.1	1.2e+02	3.9	0.0	3	23	628	648	627	648	0.90

Sequence Information

Coding Sequence: GAACTGCTGGATCACGTTAGACTTCATGGGGAAGAATTGGCAGCTATTCATAAACAAAACATAGATTTCGAGTTAAGTTCCAAATGTAAACAAGTGTCAATTTCTGATGGCGGCGTTGGTTGTTCGAAAGATGAAACTACTTTTATGGAACAAATGATTCAGATAACATCACTCAATAATGTAACGTTGGCTTCGAAGAACGCAGGAGTTCCACCACCGCCACCGTCACTCCTTTTAGACACTCGCGCTCTTCCAGATGTTCCAATGGTCTGGGTATCACGGCCAGACGGTACTCTGTCGAAAATGCTCAAGTGTCGTCACTGTCCATATGTTTCATCTCGGCGTGCGGAAGTGCGCGAACATGAAACAATGCACGTAGATACGCCTACGCAGACTCCTTCAATTGCTTGCACGGACTGCAGTTTTACTTGTTGGCATCGAGACATCATGATCGCACATACGGAGATGCATGCAGGATCTCTGGGTACTGTTCACTGTCTTGTGGATGAAACGCGACCTGATGCCCAACAAGCAAGCGATTTGGCTACTCTGCTCGGCATGACACACACTCCTATGCTGGGCGCTGAACCTGATTTAGAGGAATCTCGTCTAGTCCATTGCTGCGGTAAATGTCCGGCGCGATTTCTATGTGAGAAAGAGCTGCGCATTCATCTGCGCTATCATTCCACCGAATTGGCATACTCGTGTCAATGGTGTACGTACGCAGCGCGACAGGCGACGCATCTACAAGCTCATCAAAAAGCTCATTCGACGGAATATCAGGAGCGCACGAAATATTTATTATCCGTGTATGGATTCTCGCAGCGTTATCCACCACCTGCGACAGCATGCGTCGAGGCGGAGACTCAGGAAAGCAATGATGGCACGTCTAATGTCGCATGGATTGTTGTCGAGATGAATGATAATGCAAACAATTCGTACGGCAGCGCAATTACTTCTTCACTGTCGTCCGTTCAAAGAACCGGCAATTCGCAGCAAGTATTTACATGCGCAAAATGTCCAGCGCGCTACTTCAAACTGGATGCTCTGGAGTATCATATGACGCTTCACGGTTCAAATAATCGATTTAAGTGTAACGATTGTGATTATTCGTCGAAGACAGCGCAGAACCTGGTAAAACATCAAGTAGTACACCGACGACATAACGAGACCAGCGAAGTAACAACGTCATCATCTGTTACGACTGTTTCTTCTTCCGCTTCTGTCTCTATCGCTTCACCGTTACACTCTTCGCCAGATCCGCAATTCGGTATCTTTATGCGTGGAAATCCTAACTTTGTCTATCCAGGTTATTTACGAAATGGCCGTTTAAAAGAAAAGCGTTACAAGTGCCATAAGTGTCCGTCTGCTTTTGAGAAACGCGAACAGTATAGAGTTCATCTGACGTTACACGGCGCCAAGCAACGCTATCGCTGTAACATGTGCGATTATTCGGTTAAATACTACGCAAATTATATACAACATGTAAAGAAACACCAGGCAAATGCACAGGCACAAGCATCGCGCAGACAATTTGAAGATGATCGGATCTCTATTGACAGCGATAGCATCGTCGATGTAGCTACATCAAGCTCGCGTTCTAGCAAGTCTTTAAGATCGTCCGCAGTCTCTATTAATGGGATTGTAACATCATCTTCCGGTAATAATAACGCATTCGGTGTTGCCAACAACGCTGTCCTACAGTCATCCAATCAAGACAAACAAACTCTATTGTTGATGCAAAAAAAGGGAGTTATCTCGTTAACAAATGATGCTGACGTAAATACGATCCGCTGTCAGAGTTGTCCATTCTTCACCACTGACAAGGATACTATGGATATGCACAAGCGTCGCCATGGCATTGACCGTATGACTCCTCCGTGTCCATATTGTGACTACATTCCGCGCAAAGATGAGAACGTTAATGAACACATTCAGCTACATTTTACGAGACTATATAAGCCAGAGTCGTATCTTATTGTCGAGCTGTTAACGTTGACAATCGAGAAGGTCTCCATTAATAGCAAAGAGGATAAGAATGACAGCCAACGGATGAAAGAAGTCCTGTTTAAAGAATGCGCTGACGGTAGATTTTTGCCGCTTGCTGAACCAAATTCTCTATCACTAGGTACTTCTTCGATTGTGAATACTCTTAAAGAAAAGATCACTGTAGATCCAAACACGGGAGAGACAAAACATCATCTTGTATAG
Protein Sequence: ELLDHVRLHGEELAAIHKQNIDFELSSKCKQVSISDGGVGCSKDETTFMEQMIQITSLNNVTLASKNAGVPPPPPSLLLDTRALPDVPMVWVSRPDGTLSKMLKCRHCPYVSSRRAEVREHETMHVDTPTQTPSIACTDCSFTCWHRDIMIAHTEMHAGSLGTVHCLVDETRPDAQQASDLATLLGMTHTPMLGAEPDLEESRLVHCCGKCPARFLCEKELRIHLRYHSTELAYSCQWCTYAARQATHLQAHQKAHSTEYQERTKYLLSVYGFSQRYPPPATACVEAETQESNDGTSNVAWIVVEMNDNANNSYGSAITSSLSSVQRTGNSQQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLVKHQVVHRRHNETSEVTTSSSVTTVSSSASVSIASPLHSSPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCNMCDYSVKYYANYIQHVKKHQANAQAQASRRQFEDDRISIDSDSIVDVATSSSRSSKSLRSSAVSINGIVTSSSGNNNAFGVANNAVLQSSNQDKQTLLLMQKKGVISLTNDADVNTIRCQSCPFFTTDKDTMDMHKRRHGIDRMTPPCPYCDYIPRKDENVNEHIQLHFTRLYKPESYLIVELLTLTIEKVSINSKEDKNDSQRMKEVLFKECADGRFLPLAEPNSLSLGTSSIVNTLKEKITVDPNTGETKHHLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267184;
90% Identity: iTF_01267184;
80% Identity: -