Basic Information

Insect: Pseudomyrmex cubaensis
Gene Symbol: HIVEP1
Assembly: GCA_014825685.1
Location: QVOA01022221.1:28930-36727[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00083 0.09 13.7 0.3 3 23 101 121 100 121 0.97

2 9 0.00054 0.058 14.3 1.3 1 23 127 151 127 151 0.89

3 9 0.0055 0.6 11.1 0.1 1 21 365 385 365 386 0.93

4 9 2.5e-06 0.00028 21.6 2.0 1 23 1104 1126 1104 1126 0.99

5 9 1.7e-05 0.0018 19.0 4.3 1 23 1132 1156 1132 1156 0.92

6 9 3.4e-05 0.0037 18.0 0.2 3 23 1845 1865 1843 1865 0.96

7 9 0.0008 0.087 13.7 1.8 1 23 1871 1895 1871 1895 0.92

8 9 0.0023 0.25 12.3 3.2 1 23 1916 1940 1916 1940 0.93

9 9 3.3 3.6e+02 2.3 2.0 1 19 2097 2115 2097 2120 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00083	0.09	13.7	0.3	3	23	101	121	100	121	0.97
2	9	0.00054	0.058	14.3	1.3	1	23	127	151	127	151	0.89
3	9	0.0055	0.6	11.1	0.1	1	21	365	385	365	386	0.93
4	9	2.5e-06	0.00028	21.6	2.0	1	23	1104	1126	1104	1126	0.99
5	9	1.7e-05	0.0018	19.0	4.3	1	23	1132	1156	1132	1156	0.92
6	9	3.4e-05	0.0037	18.0	0.2	3	23	1845	1865	1843	1865	0.96
7	9	0.0008	0.087	13.7	1.8	1	23	1871	1895	1871	1895	0.92
8	9	0.0023	0.25	12.3	3.2	1	23	1916	1940	1916	1940	0.93
9	9	3.3	3.6e+02	2.3	2.0	1	19	2097	2115	2097	2120	0.92

Sequence Information

Coding Sequence: ATGACAGACCCACAGCTGACCAACAATAACAACAACAACAATAACAACAATAACGATGGCGAACCAAAATATCTGCACAAAAAATTTAAAAAGATGGCGACGACCGAGGTCACATCGAAGGTCGTCGAGCCCAAGAAGGAGGCCACGGCGAACAACGTCGTCCCTATCGAGACACCCAAGAGAAAGGACGCTGAGAAGGAGATTAAGGAGCCTTCAAAAGAGCCTGGCAGCAAGCTCGAGACTTCCCCGGAACCCGTGGGAGCTGAGCCTACCGTCGAGTCCCGGAAGGCCGCTAATATTTGTCCATACTGCAAGCTGGTGTGCGCCAAGCCGAGCGTACTTCAAAAGCACATCAGAGCACATACAAACGAGCGACCTTATCCGTGTTTACCATGCGGTTTTGCCTTCAAAACTAAGTCGAACTTGTACAAGCACCGTAGATCACGCTCTCACGCACATAAGATGGAGAAAGGCGACAAGGTATCGGAAGATTCCGACATAAGCCTATCGGACAGTGCCAGCAATGGCACTGGTACACCACCGCCGCCTCCTGCGTCGACACCCACGACGACGATAACGACGATATCCACTGCTGCATTGAAGACCGTGAAGACTGGCAAGATCTACAAACCGAAGTTTCAAGCTCGAACGGCTCTGCAGTGTTTGAATGACACCGAATCGTCTTCTTTATCTCCCAGTTCTTCCAGTAGTTCTTCTTCCTCCTCTTCTTCTTCCTCCGCTACTACGTCTGCTTCCAATTCAGTTAAACCAAACGCGGAACAGCTGCAGGAACACATCGACAAGATCATCACGGACAATCAGGCGATCGTCGAGGCTGTGGATCCGCGTCTACACAAACTGATGCAGCGCCAGCAGAGTCTGGTAGAGACAAAGCAATCGATCGAGCATCAACCATTGAACTTGTCTTCTGTAGAGCAGAGCTGCTCTCCGAGCAGCAGGAAACGTTGCTACAGCGACAGTTGCGCCCAGGAAGCAAAAGAGGATACGCAAACTTCTGAAGGTTCAATCATCAAAGATCTTCTCCTGAAGACTCGCGGTGTTGTCACGAACGGGTCGGAGACTGTGGAGAACTTTCTTTGTCCGACTTGTAATATCCCTTATACTAGCATCGACAACCTAGAGACACATCGTAGATACTATTGTAAGGGCCTCGGCAGTCCCCGAAAAGGAACTGACTATCAGACTGAGTTGGAAAAACGTGATTCTGACTTTGACTCGAGGTCTTCCGACTATTACAGCACCTTGCAGCCATTGCCCTCGCCGGGTCCTCTACTAGGCAATACTAGACTAGTCGACGCGTACGCGCCGGTTCTCAAAAAACCAAGAACAGATCTCGTTCCCACCAGCTTGAGATCGCTGGAAGAGCTCAGCAAGTATCCACGTCCAAATTCGCTACAGATGTTCGGTGGCGAGGTAAGGATACTTGACAATACAGGTGAGACGAAAACGATGAGAATCGAGCCGCGGCAAAACAATTCGCCTACCAACGAGCATCTGAGCAACGGCAAATGCATAACTACGGAAACGTCGGTCGTGGTGAGGTCTGGACTGCACTCGGGTGGTACAATGGTGCATAAACCGTCGACACCAGCGTCGGCCAGTACACCTAGCTCTTCCATATCCTTACCCAATACGCCTAAGTTGTTAGCACCCATCATACCGAACATATCAACTCCGAATATAACGCCTAACTATAACCTATTGGAACCTCCTATCCTCAACTCGCTGTCGAGCACTGCCTACAAACCGTTGACATCACTGCAACAGACGGGAGTCGCGAGTATTGTCCACTGCGGTAAAGTAATACCTTTTGTACCTGGTATGCCCGGACCGCATACGCTGACCGGTACAACCATAGACATATCTCCGAGTATAACAGCCGGCGAAGCCAATTACAAGAGTATAATAACGGATGTACCGAGTCTGCACATGGTACCTCAGCCGCTAGATCTGGCTAGTCCGGTGAAGGTGCAACCCAGTACGGTGTCCGGCATGCCGGGTCCGTTGTCTGGACATGCTTTCTCCATGCTGGACCAGCCTTTGGACCTGGCCAGTCCAGCGAAGGAGACGGCAAAAATCAATTTCAAAACTCCGAACAGCGACAGTCTGAGGAGTGGCTTGACCAGTCCTAAAGTTCTTAGTGTCAAGGTCGAGACATCGACAGATAAGTATCGTGCGAGGATACCGTCGACGCCTACTGGTGGAGAGATCGGCAAGGCAGAGCTTGATTGTCATATCAAGAATAATGTGAAATACAAGAGTCTAGAAAGCTCGCGCGAAAGAAGAGAATTTACATATGACAAGAGCCCAAAGTTGGATAGAACGTTTAGTTATCCAAACGGCATGGATCCGACGACTTCTTCTTACAGCAAATTGAGATACTCACCAAAAAACATTTCAGAAAGCAGGAAGAGGCCGTCTAATTGGGGTGTCAGCGAGATAGACGCCGGCAGGGCAGCGCCAGTAGACACGCATGTTGCAATCTCTAAATACGATCTATCTCCTCACGAAAACGGTCGATTGAAGAGTAGCATCGCTTTGGACGAACGTGGATGGACGAAGAACGCGGACGGATATTCATTTAACGGGGCCAAGGTAAAGACCGATAACGCGCCGTCAGTGATACTAGTAAATCTAGATTCTTCCAAAACAGAAGTGCCAACAAAAACTTCCGTAGAATTAGTTGTTAAGGACAAACAGCCTGAGGCCAAATCGCCGAAAAATAGCGGCGATGTCACTAAGGAAGCGACTAACGCTAAAAAGTTCTTAAGGCCCACATCGTTGCCACTGAAGCCCGGTACGTTTACAGCAAAAATGCATCACGGGATCACACCTACGGCAAACACGCTTCCTCTCATCAGTCCCGAAACTCCGCGACCTAAGAAGTCGTATGGTCAGTTGTATCTGAATGGGCACGCCTACACATATCTGGGACTTAAGTGTTCCACCAGACTGTTCTATTGCACTTTAAATCGACCGCAGCCGATGTATGTTACGCAGCAACACGGTTTGTCGATGTACTCCAATTGGAAAGTATGTAAGGAAACACCGCCAGACGTGGACATGGCGCACTATGACTCGCGACACAGGCCTCTCGGTTACACTACTGCATGGAAAAAGCAAGAAGATATTTTAACACATTCTTCGCAAAGACCAACCACTCCTGTCAGTCCGGATAGCGGATTAGAAAATGATATGCAAGAAAAAGCTAAGAGAGTGAAGATATGTGACGGAGGCTTCGAGAGTAATGAAGATTACACCTATGTGCGCGGAAGAGGTCGGGGACGATATGTATGCCAAGAATGTGGAATTCGTTGTAAAAAACCATCTATGCTGAAGAAACATATCAGAACTCATACAGACGTTAGACCGTACACATGCAAACATTGTGCATTTAGTTTCAAAACGAAGGGCAACCTTACGAAGCACATGAAGTCCAAGGCACACTATAAGAAATGCGTGGAATTGGGCGTGGTACCGGTTCCTACAACGGTTTGCGATGAAAATATTGACAAGGAAGCTATTGCACGACTGGCTGCGACTGGAGGGGGTAATGTCGAGGAATCTTCGGAAGAAGAAGAAGAGAGTGAAGGTGATGAAAGTGAAGAATCTGGCAATGAAGAACAAGAAGCGGCGCAAAGCTTGCTAAGTCTTTCGCAACGTAACACGACCAACACATTACCGGGTCTGCTGCCGTCTGGTAGACCCACGACGTATCCGTATGCGTCGTCGACTTTATCGACTACTACCATGGCGAGCGTCGTGTCTACTGTGACAAATACGTCGGTTGTGAGCAGTCAAAACGTCACTGCGCAAGGGACGGCTCCTATCCAAAATGAGATACCACATCGTTATTACTTTCCGTCGACTCGAAATTCGACAGAAGAACCGAGGATCAGCGTGATCCAGTCGTCAAAGAAGGACGATGCTGACTTCGAAGTCGAAGAAGTCACCGATACTTCGTCTGAATCACGTCATCAGTTATCTCAACCTATAGATCTCACGTTGAAACAGACAGCACAATTGCTACCTTCGCCGATTCCGCAAAGAGCTAGACCTGCAGATATTCTAACTCCTGTTTCGGAACCGGTCCTCTTGCAGACGATAGTTCAGACGATGGAACGATTGCCTATACAAGGTAGAGAATGGAAGCCGAACGCGGAAGGTCACATGTTGCAAGCGTATCTTACGGAGAGACACGTAATGGACAGCAAAATCAAACAGCAGTATCGTGTAGGAAGTACTAAGATAGACAACAAGCAGGTACAAGAAAGAGAGATTTATTCGCGGCATCACGATCTTGGCAGATCTAGGCACGTAGATTGCAACGGCGTCCCGACAGTGACGTATACCGATCCTAGTAAGATGCAGCATACTATTATAGAATCTAGGATTAAACATATGACAAAGCATACTAGTGACGACATCAAAATGGAGATCAGGGAGAAGATTTATCAAAACAACATGGCGATAGAAAGACGAGCGTTCGACTATGAAAATATTCATAAAGATAAAGAGCAGTCCAATCACCTGGTTTCTAATCGTGAAAATTTTGAGCACAATTTAACTAACGATCCTGCTGGCATAAGACCGAATATCGAATACAATCTGCCTGTAACTAAGAACAACAGTTCCATAGAGAGATTGGTTTATTTTGGTGACGCATCTCACCGCAATACACCGGTGATCGAGCGACATTCACCAAAATCCTTGAATATGGACGTTAATCGACCGCCGTTGATGCACGTGAACAACGACGTTGACAGAAATTCCATGTTCACGATGAAGATGATGAGTGAAATAGAAAGACCCAGAGAATGCCACTCTGTTACCCAAGAAATGAGATCCGCGAATCACGAAATAAGAGCCGTAACTAGCGACATGCGAATACAAAATCATAGTCCACGAAATCTCGATCTGAGACCGCCCAGTAGGGAGATTAGAACGCCCGGTCAAGAGCACAAAACACCAAATCAGGACTTGAGGCTACCGAGTCAGCAAGAGTACAAGATGGAGTACAAAATGCGCGGACAAGAGATGAGACCACCTAGCCGTGAATATCTGGCGGCATACAACGCTCACGATATGCAAGTCATTCAGGAGCTTATGCCGTCGACAAATATGGAAATGCGACAAACAAATTCAGATAATAGACCGCCAAGCAGTGACATGAGAGTTCTCTCGGAATACAGGACGCAATCTTCGGATCATCGTGCAAACTACGAGGTAATACAGCCATCTATGCACGAATCTGGCAAACCGCAAAACATCGATGCGAGAAATACTCAAGATATGCGAATTGTCTACTATGACACAAAACACACTGCGGAGAAACAACAGAATACATCGGACAATATAAAACACACGGTAGCTAGAAAAATAGTCGTCGGACCGGATTTTCGATCGCCTTCTCCGAATACGGGAAACCCGAAACCGCAAGCAGAATTTTTACAACCGTCGAGCGGACCGCCACCTAACTACGTTAGTATGACAGATGATGGGAGAAGTATATGTGTAATTTGTAACAAGATATTCAACAAGCCTAGTCAGTTACGCTTGCATATCAACATTCATTATTTTGAACGGCCGTTCAGATGTGAAAGTTGTGCAGTTTCCTTCCGAACAAAAGGTCATTTAACGAAACACGAGAGATCCGTATCCCATCACAATAAGGTCAGTATGACTTCTACATTTGGTGCAGCGACTACTAGCAATCCCAGGCCATTTAAATGTACGGATTGTAAAGTAGCATTCAGAATACACGGCCATTTGGCCAAGCATCTTCGTAGCAAAATGCACATAATGAAGTTAGAGTGCTTAGGCAAGCTGCCATTTGGAACATACGCGGAGATGGAAAGGTCGGGTGTCAATTTGAACGATATTGACACTACAGACTGTGATAATAGTCTTAATAGTTTGAAGATGCTAGCTCAAAGATTGTGCGAGAAGGATCCCGCTAAGGTCGCGCAATGGGACACGGAAACTCTGCCCGGGCCGGTCGTAAGCGGTAGCGAAACCTCATCGGACGAGGGCGAGCCTATACCGCAGCACGCATTTCACGCGCAGTACATGAAAGCGACGGACGCGGATGTCTCTCGATCATATCACGTGCCAATTGCTACCGAGGAATCGAAAGCCATGAACGACGTTCGCCTCCGTAGTCCCCAGTTCGGTCAACAGAGACGCGTTTTCACCGTTAAAGAGCAGCGACCAATGCCGGCTGTTGTTTCGACCGAAGACACAAAAGCGGAAGACAATTTACAATCATACAAGTGCCAAGTTTGCCATGTATCTATGCGTACTGTAAACGAGTTACAGGTACACTGTTTTGTTGAACATAACATTGAAACAGAGTCTAGTACAAATATTCACGGGGATAGGAGCACGGGTAAATGTAGTAGAGATAAAGAGAATACTCAGAAACTAAGTGTGGAAGAATGCGTGGTTAGGGAGGATCATAAGAGACAGAAGACGGAAGACACGTAG
Protein Sequence: MTDPQLTNNNNNNNNNNNDGEPKYLHKKFKKMATTEVTSKVVEPKKEATANNVVPIETPKRKDAEKEIKEPSKEPGSKLETSPEPVGAEPTVESRKAANICPYCKLVCAKPSVLQKHIRAHTNERPYPCLPCGFAFKTKSNLYKHRRSRSHAHKMEKGDKVSEDSDISLSDSASNGTGTPPPPPASTPTTTITTISTAALKTVKTGKIYKPKFQARTALQCLNDTESSSLSPSSSSSSSSSSSSSSATTSASNSVKPNAEQLQEHIDKIITDNQAIVEAVDPRLHKLMQRQQSLVETKQSIEHQPLNLSSVEQSCSPSSRKRCYSDSCAQEAKEDTQTSEGSIIKDLLLKTRGVVTNGSETVENFLCPTCNIPYTSIDNLETHRRYYCKGLGSPRKGTDYQTELEKRDSDFDSRSSDYYSTLQPLPSPGPLLGNTRLVDAYAPVLKKPRTDLVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQNNSPTNEHLSNGKCITTETSVVVRSGLHSGGTMVHKPSTPASASTPSSSISLPNTPKLLAPIIPNISTPNITPNYNLLEPPILNSLSSTAYKPLTSLQQTGVASIVHCGKVIPFVPGMPGPHTLTGTTIDISPSITAGEANYKSIITDVPSLHMVPQPLDLASPVKVQPSTVSGMPGPLSGHAFSMLDQPLDLASPAKETAKINFKTPNSDSLRSGLTSPKVLSVKVETSTDKYRARIPSTPTGGEIGKAELDCHIKNNVKYKSLESSRERREFTYDKSPKLDRTFSYPNGMDPTTSSYSKLRYSPKNISESRKRPSNWGVSEIDAGRAAPVDTHVAISKYDLSPHENGRLKSSIALDERGWTKNADGYSFNGAKVKTDNAPSVILVNLDSSKTEVPTKTSVELVVKDKQPEAKSPKNSGDVTKEATNAKKFLRPTSLPLKPGTFTAKMHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRLFYCTLNRPQPMYVTQQHGLSMYSNWKVCKETPPDVDMAHYDSRHRPLGYTTAWKKQEDILTHSSQRPTTPVSPDSGLENDMQEKAKRVKICDGGFESNEDYTYVRGRGRGRYVCQECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAATGGGNVEESSEEEEESEGDESEESGNEEQEAAQSLLSLSQRNTTNTLPGLLPSGRPTTYPYASSTLSTTTMASVVSTVTNTSVVSSQNVTAQGTAPIQNEIPHRYYFPSTRNSTEEPRISVIQSSKKDDADFEVEEVTDTSSESRHQLSQPIDLTLKQTAQLLPSPIPQRARPADILTPVSEPVLLQTIVQTMERLPIQGREWKPNAEGHMLQAYLTERHVMDSKIKQQYRVGSTKIDNKQVQEREIYSRHHDLGRSRHVDCNGVPTVTYTDPSKMQHTIIESRIKHMTKHTSDDIKMEIREKIYQNNMAIERRAFDYENIHKDKEQSNHLVSNRENFEHNLTNDPAGIRPNIEYNLPVTKNNSSIERLVYFGDASHRNTPVIERHSPKSLNMDVNRPPLMHVNNDVDRNSMFTMKMMSEIERPRECHSVTQEMRSANHEIRAVTSDMRIQNHSPRNLDLRPPSREIRTPGQEHKTPNQDLRLPSQQEYKMEYKMRGQEMRPPSREYLAAYNAHDMQVIQELMPSTNMEMRQTNSDNRPPSSDMRVLSEYRTQSSDHRANYEVIQPSMHESGKPQNIDARNTQDMRIVYYDTKHTAEKQQNTSDNIKHTVARKIVVGPDFRSPSPNTGNPKPQAEFLQPSSGPPPNYVSMTDDGRSICVICNKIFNKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLNSLKMLAQRLCEKDPAKVAQWDTETLPGPVVSGSETSSDEGEPIPQHAFHAQYMKATDADVSRSYHVPIATEESKAMNDVRLRSPQFGQQRRVFTVKEQRPMPAVVSTEDTKAEDNLQSYKCQVCHVSMRTVNELQVHCFVEHNIETESSTNIHGDRSTGKCSRDKENTQKLSVEECVVREDHKRQKTEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01271484;
90% Identity: iTF_01270736;
80% Identity: -