Pcub002549.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_014825685.1
- Location
- QVOA01022432.1:17956-22599[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.059 1.4e+03 -0.6 5.8 63 109 66 115 22 155 0.55 2 4 0.28 6.7e+03 -2.9 0.9 77 107 226 255 194 269 0.51 3 4 0.37 8.9e+03 -3.3 0.1 76 96 381 401 357 447 0.49 4 4 1e-100 2.4e-96 322.2 9.2 1 218 705 917 705 917 0.91
Sequence Information
- Coding Sequence
- ATGGCACAGTTGCCCGAGATGGAATCGCCTTCGGCCTGTCAGGAGTATCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGATCTCGCAAGTACGTCGTCGACGACGATGACGACAACGCCAGTAGAAGATGCCGCGCGTCAATCCGTCAATGGGGACTTGCGTGAGAATTCGGTGATGGTGCATGAGAGGGTAAACGAAAACTCGGAGAACGGAGAACTCGAGGAAAGACAATCCAGTGATAATCTTTGTTTAGAAAAAGAAGAAAATGAAAAGAAAGAAGAGAAAAAAGAAGTGGAAGATCAGACAGTGGAAGATAAGGCCAATGAAGACAAAGAAGATTCGGTAGAGAAACTTCTTCAGGAACCTAAGGAGTCGATAAAGACAGTCGGTCCTCAAACTCATGATCTTGACGACGAGGAAACCAGGCTTGAGGAACCAGTCTGCATTTCCAGGAAGAGATCGGTCGAAAGCGATTTCCTACCAATCGACGAGGAAGTGAAGAAAGTGGGTCTTGAGATTTCGGAAGAGCAGGCGATGCAGCTGAAAAACGATATCAGGAGGCTGTCGCCGGTGCTTGTAAGCACGCGGGAGAGAACGCTTGGCGAAATATCTTTGATTTCGGAATCATGTTCCTTCAAGGACGACATCGATGATAAAACAATGTCGAAGAGCAGCAACGATAATCACGACGAATTGTCGCAGGAGAACGAGATTCCGGTTACCAAGAACCGTGCGGAAAAAGATGTCGACGAAGCGAAACAGAAAGCTATTGCCAAGGTTACCGCGAGTTCTCCGGCAGAGTGCACAAGTTGCGACGGTGCACTCGAGATCATCTCGGATCGCGAAGAGAGAAAGACAGTTGAGTGCGACAGTCAAGAGAAGATATTCGATGTTGATTCTTCAGTGTCCTCAGGGTGCGACAGTTTCAAATCGACGGAATCGAATCAACATGACAACGTCAGTGATATCGGGAGCGCGTCTGACGTTTTGATTGAAAAGTGCGTCGACGAAACGACGAGTATTGTAGTCTCAAGCCCCGTCTGTCGGCGTTTGTCGGTGGTGCTAAATCGCATCGACAACGTAGACGTGATAAAACCGAAAGAGGATGCCGTTGAAAAAGACTCAATGTATTCCGAAAGAAAAAGAAATCTTGAAGAGGAATACAGCTCGTCAGATAAGACTCCCTCGAAGAAACAGCGGTGGCATAACGACACTTCGCCGATGACTAGATCAAGGACAAGCGAGATGATGGAACCTGTCCGTAGTCCAAATAATCTGGTTTTGAAGAAGTGCAAAGTGGTGCTAGAACGAATCAGCGACGAGAAACAATCTCAATCGGTAAAAGCCGATGAAACCGGTACTACTTTGCAGAAACTTGAGAGAGAAGGATCCGCGCCGGTGTCCGTAATCGGCCAGTTGGAGGAAGACGAAGAGGTGGTGCTGGCGGGTGCTTCGCTTTCTGGCGAACGAGATCAAGTGTTCAACGAACTGGACTCCTCGGAGACGATGCCAAGTTCGCCGGAGGAGATGTCGGAACCAGCAATGGACGTCGTCGAGAGTGTCGACACAGAGACGGAAACTGAGACCGGCTCCGACAGTTCGGAGGTGTCGCCTATCGTGAACATTCGGGAATTGCGCAACGTCGACATAGCGTCCGATCAGTTGCCGTGTCCAGAAGCGGAACCGCTTTGCTGCGTGGAGACGATGGCGCCGATTATGACAAGGCTGGAGACCGAGCGACCGGAAACTTACACCGAGGATTCCGCCGAGAGTTTGGCTCTGACAACTGGCGCCAGAGACGACGTTAGATCTGATGGGAGCGATTCCGGTCTAGGTAATGAAATTCCTGGTGATCCTGGTCCCACACCGGCCCCTGAAAGCGATTCCGAAACCTCTTTTCTCGATAGGCTGCCGGATGATATCCTCTCCGACAAAGAAAAAGGCATGAACCAACTGGACAACTTCGCGACGTCGTCGGGCGCGACCGGGATACCGGAACAGCCGCCCATGACGAGCTTTCGACCACTGCCGGCTAAGAGCAATCTAAAGCGCAGATTGATCGACTGCATGGAGAATGATGAGTCCCGGAGCAACACCGAAGAGCCTGTGAAGAAGAAGCGCAATATCCATTTCGACGCCGTAACTGTTTATTACTTTCCAAGGGCGCAGGGTTTTACCTGCGTACCTTCGCAGGGCGGCAGCACGCTCGGGATGAGCGCCACACACACACACGCCGAGAGATTCTCATTATCGGAACACGCCGCCGAACAGAGGCGAATTCATCGTGCCCGCTTGGCGCAGCTGCGCTCCGAGCGCAACTGCGCGATCAACTGCGTGACCGAAACGGCGTCCAGCTCGGAAGATCCGAGCGACGACACCGACGAGGAGCCGAGCGATAATGAGGATCTTGACATCGATAGCTACTACTTTTTGCAACCGGTGCCGACGTCGCAGCGTCGGGCGCTGCTTAGAGCGGCCGGTGTCAGAAGAATAGATGCCGTTGAGAAGGACGAATGTCGTGACATCCGGGCGAGCAGAGAGCACTGCGGATGTGGTTGTAAGGGATATTGCGATCCTGAAAGCTGTCCCTGCAGTCGAGCCAATGTCAAATGTCAAGTGGATCGACCTGGCTTTCCTTGCGGCTGCACGCGAGACGGTTGCGCGAATAGCTCCGGCAGGATCGAATTCAATCCTATACGAGTGCGAACGCATTTTATTCACACTCTAATGCGATTAGAATTGGAGAAGAAACAACGCGAGGAAGAGGGTAGCGGCGATCACGATCAGACGGACAATCAGGGCCAAAGCAATAGAAATGGATCATTGAGGAATATCGGTTCCCTCGGCTCTGTGATGGACACTGCCGGTAACGGCGACGTGTGTACAATTCCAGGACCTAGGAGCGGAAATGGAGGCGGGGGTGGATTTACAACTCTGCACTACGAGACGAGTCATGACGGCGGCATAGTTACGGCCGGTTGCCAGCCGGAAGTGCCCGGTACGCGAGAGGACAGTCTGGATTTGTACGCAATCAGTGACGATTGTTATCCGAGCGAAGATGCAGTAGACGGCAGCCAATCGATCGTACAGCGAAAGCTGCATCCAGAGTTCAGCCAAGCCTTCCAGAGCTTCTCGCCGGGTGGCGCACAAAGCCCCGGTGGCAATGGTGGCGGTATGAGCTTCCAACAGTCTTCGTATCAGGATTACGGCTCGCCGTATGCGGGCCTCCCGTCCACGTCGCGGGTGCCACAGTTTCAACAGCCCCAGTTCCAATCCTCGGCACCGCCCAATCCGGCCGCGTTTTCGCACTACGGACCGTACGGCGCGGCCCAAAACACTGCAAGCGCCGGTCTTCAGAGTAACTGTGCCGCCCAGGTGCACCAGGTGCCACCTCCGGGTCAGCAGCAACAGCAACACTCGTCTTACGAGACGGCAGTGTTCGCGCAAGATGACGCCACGAGTACCGCGCAGTACACGAATTTAACTAATTCGGTACAGCCGATGAATGCGAGTGTCGTGCAGCAGATGCAGAACAAGCTTGAGCCTTTCTCGGAACTGCTCAGCGGTAGATATTCGTACTACGGCGAGATGCACGAGCCGCAACAACATCACGGTACTTATAGTACTCACGGAACGACTTCGAAGATTGCGGAATTAATCGAACCCGGCCAAGTTACCGGCGAGCAACAGTCCGAGAACACGTCCGAGGATTGCGACGAAAACTTCGGCGAAATCATTAAGAAATCCATGGTGGAGACCGTATCTGCCTAG
- Protein Sequence
- MAQLPEMESPSACQEYLVEAQEDSTSVDLASTSSTTMTTTPVEDAARQSVNGDLRENSVMVHERVNENSENGELEERQSSDNLCLEKEENEKKEEKKEVEDQTVEDKANEDKEDSVEKLLQEPKESIKTVGPQTHDLDDEETRLEEPVCISRKRSVESDFLPIDEEVKKVGLEISEEQAMQLKNDIRRLSPVLVSTRERTLGEISLISESCSFKDDIDDKTMSKSSNDNHDELSQENEIPVTKNRAEKDVDEAKQKAIAKVTASSPAECTSCDGALEIISDREERKTVECDSQEKIFDVDSSVSSGCDSFKSTESNQHDNVSDIGSASDVLIEKCVDETTSIVVSSPVCRRLSVVLNRIDNVDVIKPKEDAVEKDSMYSERKRNLEEEYSSSDKTPSKKQRWHNDTSPMTRSRTSEMMEPVRSPNNLVLKKCKVVLERISDEKQSQSVKADETGTTLQKLEREGSAPVSVIGQLEEDEEVVLAGASLSGERDQVFNELDSSETMPSSPEEMSEPAMDVVESVDTETETETGSDSSEVSPIVNIRELRNVDIASDQLPCPEAEPLCCVETMAPIMTRLETERPETYTEDSAESLALTTGARDDVRSDGSDSGLGNEIPGDPGPTPAPESDSETSFLDRLPDDILSDKEKGMNQLDNFATSSGATGIPEQPPMTSFRPLPAKSNLKRRLIDCMENDESRSNTEEPVKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERNCAINCVTETASSSEDPSDDTDEEPSDNEDLDIDSYYFLQPVPTSQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSSGRIEFNPIRVRTHFIHTLMRLELEKKQREEEGSGDHDQTDNQGQSNRNGSLRNIGSLGSVMDTAGNGDVCTIPGPRSGNGGGGGFTTLHYETSHDGGIVTAGCQPEVPGTREDSLDLYAISDDCYPSEDAVDGSQSIVQRKLHPEFSQAFQSFSPGGAQSPGGNGGGMSFQQSSYQDYGSPYAGLPSTSRVPQFQQPQFQSSAPPNPAAFSHYGPYGAAQNTASAGLQSNCAAQVHQVPPPGQQQQQHSSYETAVFAQDDATSTAQYTNLTNSVQPMNASVVQQMQNKLEPFSELLSGRYSYYGEMHEPQQHHGTYSTHGTTSKIAELIEPGQVTGEQQSENTSEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268264;
- 90% Identity
- iTF_01271206;
- 80% Identity
- -