Pcub015048.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- kn
- Assembly
- GCA_014825685.1
- Location
- QVOA01009275.1:40765-55867[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-39 4.4e-35 121.4 0.0 39 116 345 422 338 425 0.95
Sequence Information
- Coding Sequence
- ATGCATCGTTACGCTTTGGCTAACTGGCCGAATTTCCCGTGTCCATCCCCAAAACGATCGACTAACGACCGTGCGCACGAACATTGTCGACCCTTCCGCGAATTACCGATGAAAGCAACGATATACAGGATCGGCGGTAATTCGTGGTACTTAGCGGTGATGTTGATAGCTCTAGAATCTCCATCTTTGGTATCCAAGGTGGGCGTTAATACAGATCCAAGCGGCTTCATTCATTGGTTGAACGGCTCGAATCGGATTGGTGTACGCTACGAAATGGGCGAGTCTATCTGGACGGGCTGGTCGGTGCGCTGTGCCACTCGTGATCACGCCCACCGCGATAGTCCGACCCCACTGGGACCTGCTGGCGCACCGCTAGTGCCGGCCCTGACACATTCGACAAGCGGCGCCGTAACGGGAAGCAACGTGCAACTGGGGACCTCCTCGAAGGACCTCTCCGCTGGTCGCGAGACACGCTTGCAACGTTTTGGCGGCGACGATAACACGCATCAGAGTGCCGGCGGAAAGTGCTCAGATTATCACTTCTGTGCACGCACTCGTGTCTTATACACCTCCACCGGAAACGTGGCACCGGGGACACCCGCTCTGACGGAGGGACAACCGGTGGAGTCTCTCGCGGAGGCGCGAAGGGGTAATCGAGGGGGTGACGAAGGTTCCTGCAAAGAGTGGCACCGCGAAGGAGGAAGCCTGTTGCCCCAAGATAATCCTTACGGCCTCACCACGCGGTCCGACGAGTGGAGCAGTCTCCTGCCCAGCTCCACGATCGTGGGTGCTGGGGGGTCGGCATGGCTCGGACTCGGCGCCGGGGGTGGTACCGGGGCCACTACGGGGGGCGGAAGTCCCGTAGAGCTCGAGGGCCACTGGGGACGTAAGCTGTACGGCGCGAGTGTGGCACCGCCACCCCCGCCGCCCCATCATCATCCGCGGGCACCGTTGGTTTTCGCGCCTCAAGATATGAGGCAGATACTGAAGGAAGAACCTGTGCCACCACGTGCTTGGCCGCAGCCCGCGCTTGCCGACAACGGAACGGTTGGCGTGGGTCGTGCGCATTTCGAGAAACAACCGCCGAGCAATTTGAGGAAGAGCAATTTTTTCCATTTCGTAATCGCCCTTTACGATCGACACGGTCAGCCGATCGAGATTGAAAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAATCGGAAGGCCAGAAAACAAACAACGGTATTCAATACAGTCTGCATCTACTTTACTCCAATGGTGAGTGCTACAAAATTTAA
- Protein Sequence
- MHRYALANWPNFPCPSPKRSTNDRAHEHCRPFRELPMKATIYRIGGNSWYLAVMLIALESPSLVSKVGVNTDPSGFIHWLNGSNRIGVRYEMGESIWTGWSVRCATRDHAHRDSPTPLGPAGAPLVPALTHSTSGAVTGSNVQLGTSSKDLSAGRETRLQRFGGDDNTHQSAGGKCSDYHFCARTRVLYTSTGNVAPGTPALTEGQPVESLAEARRGNRGGDEGSCKEWHREGGSLLPQDNPYGLTTRSDEWSSLLPSSTIVGAGGSAWLGLGAGGGTGATTGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGECYKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01069440;
- 90% Identity
- -
- 80% Identity
- -