Pcub004051.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- kn
- Assembly
- GCA_014825685.1
- Location
- QVOA01002416.1:14444-21166[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-114 5.1e-110 368.9 11.9 205 564 1 353 1 364 0.84
Sequence Information
- Coding Sequence
- ATGAGACGCTTCCAGGTGGTCATTTCTACGCAAGTGGGTGTAGAGGGTCCACTGCTAGCGGTCTCGGACAATATGTTCGTTCACAACAACAGCAAGCATGGGCGCAGGGCGAAACGTCTGGACCCGAGCGATCCCAGCGAGTATAATAGCTTGTATCCGCCACTACCTCTTCAAACACCGTGCATAAAAGCGATATCGCCTAATGAAGGCTGGACGTCGGGTGGATCCACCGTCATAATCATCGGTGAAAACTTCTTCGACGGATTGCAAGTTGTTTTCGGAACGATGTTAGTTTGGAGTGAGTTTATCACTCCACACGCGATCAAAGTTCAGTCACCAGCACGGCAAATACCTGGCGTTGTTGAGGTCACGTTACATTACAAGAGCAAGCAATTCTGCAAAGGACAGCCTGCGGTAAACGAACCCACGATCGACTACGGCTTCCAAAGGTTACAGAAGCTTGTTCCGCGGCACCCGGGTGACCCCGAAAAGCTTCCAAAGGAGATAGTATTGAAGAGAGCGGCGGACTTAGCGGAAGCCCTTTATAGTATGCCTAAGAGCGGAAACATGGGAATTACGGGGGCGCCCAGGAGTCCGGGTTCGGTGCACGCACCCGCGCCTCCCACATCTAGTTCGGCAACGGCGTTTAACTCGTACACGGGTCAACTCGCGGTGACGGTGCAGGAAAACGGTAGTGCAGCGAAGTGGACGGACGACGGTAGTTCTGTGACAACAGGAGCTACTGCTGGCGGTGGAACCAGCGGCGGCAGCGGTGACGGAAGTGTCGGTGGTAACGTCGGCGGCAGTGCCGATGCTTACAGACAAAGTAGCAGCGCAAGTCCACGTGGCGTCGTAACCGGCGGTGGTTATTGTGGTAGTTCCGCGAGCACGCCACACAGTCACAGTACTAACGGAAGTTATTCCGTCGCCAATCCGTACACCAGCAGTCCGACTCTCTACACCACGCCGCACGAACAATACGGCATATTCTATACGTCCGGAGACGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPSEYNSLYPPLPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGTMLVWSEFITPHAIKVQSPARQIPGVVEVTLHYKSKQFCKGQPAVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEALYSMPKSGNMGITGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGATAGGGTSGGSGDGSVGGNVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTSSPTLYTTPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00867183;
- 90% Identity
- iTF_00765327;
- 80% Identity
- -