Pcub013318.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- -
- Assembly
- GCA_014825685.1
- Location
- QVOA01012337.1:4406-4828[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-05 0.039 14.4 0.5 33 62 42 71 4 74 0.90 2 2 0.00016 0.15 12.4 0.3 26 63 70 107 68 109 0.87
Sequence Information
- Coding Sequence
- ATGGCGGTGTCGTCAAAGAACCTCAAAGGCACATACATGCGCGGCCTTAGGACGTGCGCCGAGAAACTTGATGACACTGTCCGCCTTCTGGCCGAGAGGGCCGAGAAGATCTCGGGCGACCGGAACGTCGAGCGTCTCCGCACCTCTAACGACCGGTTGACCCGCGAGATAGAAAAGGTGCGAAGCAAAGTGGCAGGGCTCCGCGCTGCCCGCGACGCAGCGGAAGAGAGGGCTGCGAGAGTCAAGCGGGAAAACAGGGCGCTTAAGGGCGAGGTGGCGGCCATGCAGGACGATATGGAGGCTCTCTGCTGCGACCTGCAGGCTGTCCGGTCTGCCGGTATCGCCGAGCGGCTTGCCCGGTCGCGTGGGGATGAACATTCCCTGTCGGCCCGACCGTCGCCGGAGCCGGAGCCTAGGGCCTAA
- Protein Sequence
- MAVSSKNLKGTYMRGLRTCAEKLDDTVRLLAERAEKISGDRNVERLRTSNDRLTREIEKVRSKVAGLRAARDAAEERAARVKRENRALKGEVAAMQDDMEALCCDLQAVRSAGIAERLARSRGDEHSLSARPSPEPEPRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -