Pcub004553.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- -
- Assembly
- GCA_014825685.1
- Location
- QVOA01018402.1:13032-18104[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 2.3e+03 -0.9 0.1 32 46 219 233 208 242 0.76 2 2 2.1e-08 2.1e-05 24.8 11.3 5 62 458 515 455 517 0.93
Sequence Information
- Coding Sequence
- ATGCGTCAGAGAACCCTTCAGTTTATTCCTTTTCCTTATACTGATGCGCGCGCTAGCACGGATCGATCGAGCTTTCTTGGGTTTTTTTCTAAAAGCTCTTCCTCAGCTCAAGTGGAAGGTACACCGACTCCGATCGTCTCTGGGAGGGCTTCCAAAATCCCTCCCATCTACGAACGTCCAATAACCAGCAACATTTCAGTTGAGGAAGGAGGTGTTATTAACGTATCGAAATCATGCAGCCGTCAGCCGTTAACGTTATCTGTTACTCGTGGCGTGAGATCGCGGCCGCTGGACGATGTAAACCCCGGTGTTGTTGTCGATACTGTACCACTTTTAAGCCCGACGATGGAGTCCGAGCTTTTGAAGCAGCCCTGGACGTTCCCGCGCACAAAGATCAATCTGACAAAAGACGAGGACAACACAAACTCCGCGCAGACATTCTCTTCCTGGGAGGAGGACTTTCAGGATCTGAGCAGCTGGTGCATGGACACGTTCCAGGGTCAATGCGATTTTCATATAGGTGAATCGGCTACGTTTAAAATATCAGGTACGAAATACGAGGGTAACGGCGTTTCTGTGGATGAGGAGAAATTGTTGAAGGATTTGAAGAGCACGACTAATGAAGAGAAGCGCAATTTGAAAATGGATACCGTTAAAACCGTCGAAGAGCTAAGTGACAAAAATCGTCACTTACTGTTATCTCCATCAGATATGGTTAACGAATACACGATAGGATATAGTAACGAGGAGAACAACGCAACCAGCTCGTGGTTAATGTCACCAGAATCAACAGCTTCTACTACAGCTTCTACGTCTTCTACGAGTAAAAAGCAGAACGCTGATGTCGGCGCGCCGCTCCAAGTCGCGAACGATATCGATTACACTTCGTTCGACTCCACCGCTAATAAGCGCGAAACTGATGAGATAAACTGGGATGAATTACGCACGATCGAGACAACTGGATCGGAGACGTTCGACTTACTGTCGTACCTTTGGGACGAAGACGTACGTCCATCAGAGGGTAGCGTATCTACCGAATCGTCAGTTAAATTCAAATCGCTCTCACCGGCATCGTCGTCGGTATTTTTACACACTCCCAAAGTGAAGATAGAAGAGGTTAATAATGAACCAACACCACCGAGGCGTCGTAGAATGGAAACTCGGGCGACGACGGCGACGGTGACCTCGTCGTCTTCTGCGGAGGCACCTCCCGCAACGCCGTCGCGAAGATCAGAAAGAAAGAGGACGACGTCCACGTCTAGTGGCAAAGAAAAGGAGAAAATCTCTGTTCTAAGAATAAAAACGAGAGATAAGAACGGTAGGAAGAGATATTACGAGAGCGAGTCCGATGACGATGTCGCTCTCGCGCAGTACAGGGAGTGTCGGGAGAAGAACAACGAGGCCTCGCGAAGATCACGAATGAACAAGAAGGCCAAGGAATCGGAGATGGCTGTGAGAGCGGTCGAACTGGAGAGAGACAACAAGATACTTAAAATGAAGGTTGAGGAGCTGGAGAAGCTGGTGACGTCAATGCGTAGCGCGTTACTACAATCTGCTTTGAAAAAAGAGTTTTAA
- Protein Sequence
- MRQRTLQFIPFPYTDARASTDRSSFLGFFSKSSSSAQVEGTPTPIVSGRASKIPPIYERPITSNISVEEGGVINVSKSCSRQPLTLSVTRGVRSRPLDDVNPGVVVDTVPLLSPTMESELLKQPWTFPRTKINLTKDEDNTNSAQTFSSWEEDFQDLSSWCMDTFQGQCDFHIGESATFKISGTKYEGNGVSVDEEKLLKDLKSTTNEEKRNLKMDTVKTVEELSDKNRHLLLSPSDMVNEYTIGYSNEENNATSSWLMSPESTASTTASTSSTSKKQNADVGAPLQVANDIDYTSFDSTANKRETDEINWDELRTIETTGSETFDLLSYLWDEDVRPSEGSVSTESSVKFKSLSPASSSVFLHTPKVKIEEVNNEPTPPRRRRMETRATTATVTSSSSAEAPPATPSRRSERKRTTSTSSGKEKEKISVLRIKTRDKNGRKRYYESESDDDVALAQYRECREKNNEASRRSRMNKKAKESEMAVRAVELERDNKILKMKVEELEKLVTSMRSALLQSALKKEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268772; iTF_01266659; iTF_01270958; iTF_01269559; iTF_01268032;
- 90% Identity
- iTF_01268032;
- 80% Identity
- -