Pcub016744.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- cnc
- Assembly
- GCA_014825685.1
- Location
- QVOA01022767.1:51737-53861[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6 5.6e+03 -2.2 0.4 19 29 226 236 226 244 0.78 2 2 7.6e-16 7.5e-13 48.7 8.4 3 65 283 345 281 345 0.96
Sequence Information
- Coding Sequence
- ATGCGAGAAGCTACATTCGAGATAAGAAAATTTATATCAAGCATGTACACCATGCGAATGTTGGACAACGGTAGCAACAATGCGTCCGGACCGACCGGCGCGGCGGCTCTACCTGGTGTGCAAACAGCTGGTGGCACAACTTCGACGGCCACGGGCGTTACGACTTTACCTGTTGTAGCCGACGAAAGAATGGATGCTTCAAGCGATAGCGCCGTGAGTAGCATGGGAAGCGAGCGCGTACCGTCTCTGTCGGATGGCGAGTGGATGGAAACTGGATCCAATTCCAGTCATACTCAGGCGGACTCCCATTACACCATGGATTACGCGAACAAGTATCGCATGCCATACGACTGCAACTACTCGGTATCCGGGAGAAACGCCGGCTCTCCGAGATGTCAAACGGAACGAACGGTACCGCCGGTCGCTCAGAAGAAACATCAGATGTTCGCCAAGCGATATTTCCAAGAACAAGGCACTTGCTCACCTTTAGGGGCTACCACACACCCAACCACTCCAATGAAGTACGAATACGACACGCACACGGTCGGCGCGGGTGCACCCGCGAACACGTATTCTGGACCAATCGAGGGTGCAGCCGGGCCGCAGTCAGAAATGAAATATAGTTATAGCGTGGATTTCAGCCGTCATCAATCCGGTTCTCTTCAACGCCCTATTTCTCGTGACAAGAAAGTTCGCAAAACTGAAGAAGAACATCTAACGAGAGATGAGAAGAGAGCAAGAGCGTTAAACGTACCGATCGCAGTCAGTGACATCATCAATCTTCCCATGGATGAGTTTAACGAACGTCTCAGTAAATATGATCTCAGTGAAGCCCAACTATCCTTAATACGCGACATTAGAAGACGAGGCAAAAACAAGGTCGCCGCGCAGAATTGTCGTAAACGTAAATTAGATCAAATCATAAGTCTGGCTGACGAAGTGAAAGAGATGCGAGATCGTAAGAACAGGCTTCTCCGCGAGCGCCAATATATGCTCATTGAAAAGCAGCGAGTGAGAGACAAATTTAGTCAGCTTTACCGTCATGTTTTTCAGTCTTTACGAGATCCAGATGGTAATCAATACCATCCGTACGAATACAGTCTTCAACAGTCTGCGGACGGAAACATTCTGCTAGTTCCCAGAAATCAGACGAATCCGCACCAGTCACATCAGTCTTCGATAGAGCCGAAGACGAAACCCGATCCTGAGCGCAAAGAATGA
- Protein Sequence
- MREATFEIRKFISSMYTMRMLDNGSNNASGPTGAAALPGVQTAGGTTSTATGVTTLPVVADERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYANKYRMPYDCNYSVSGRNAGSPRCQTERTVPPVAQKKHQMFAKRYFQEQGTCSPLGATTHPTTPMKYEYDTHTVGAGAPANTYSGPIEGAAGPQSEMKYSYSVDFSRHQSGSLQRPISRDKKVRKTEEEHLTRDEKRARALNVPIAVSDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKNRLLRERQYMLIEKQRVRDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNILLVPRNQTNPHQSHQSSIEPKTKPDPERKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765287;
- 90% Identity
- iTF_00182393;
- 80% Identity
- -