Pcoc016581.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- gatad1
- Assembly
- GCA_014839585.1
- Location
- QVOB01016378.1:9478-12102[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-10 2.1e-06 27.6 4.6 1 26 9 32 9 38 0.93 2 2 0.29 9.8e+02 -0.1 0.1 4 19 68 83 67 85 0.82
Sequence Information
- Coding Sequence
- ATGCCACTCGGTAATAAACCAGAATGCGTGAAGTGCGGGACTCGGGAGACGCCGTTGTGGCACTCGACTGATGCTGGTAATCTGTGCAACGCGTGCTTGGAGGACGAACGGAATGCCGAGGCACATTCGTCTTCCAAGGCAGACGACGACGACAAAAGCGGCTTGCTGAAGCCTAGGAGAAGCACTAGGATTACCAAATATTGCAACACAAAGACAACAGGCTCATACAGAGTTGTTCCCAAGGGCAAAGGTCGCAGGAACTTGTTTAAAAAAACGCCAATCAAGGCACCTACTGCCACCGCAACTCCAGTCACAAGCAACTATGTATTCTACAAAGGCACATATTTTCAAGTTGGAGATGTAGTTTCTGTACTTGACGTGGACGGTGGTGTTTTTTATGCCCAGATACGTGGCTTATTGACCGATCAGTATTGCGAAAAGAGTGCAGCTCTTACTTGGCTAATACCCACTTCAGCTAGTCCTCCACCAGACGAAGGTTTTGCTCCCGAAACGTACATGATCGGGCCGGAGGAAGATTTGCCACGCAAATTAGAATGTATGGAATTTGTAATGCATGCGCCGTCGGATTATTTTAAACTGAAAAATTCACCTTATCCACCCCCATTGACAGAAAAAGGAGCAGATAGGGATCAGACAAAGAGTTCATCCTTAGCTCTGGAGGGAAAAGATGTCCTCGTCGTGGTGGTGGTGCTGGTGGTGGTAGTAGTAGTGTCGGCTATATTCGGGATGACAGAAGAGACCAGTCAGCTCGGTGCCAACGAAGTTACGGCTGGTCAGAATTTGAGATCTTTTATAGCCTGCGGCAAGTCAGGCAGCTTCATATCCTTTATTTGCTGTGGTATATTCATGTTCTTCACGGCTGATACAGCACGCGCGGGCGCTGCTGTGATTCCCGCCTGCACACACCATACGGGGGCCCCAGAAGGACAAGCGGACGGGGTGAATAAGACCGTCTGGATTTGTAAGTCCCCTAAAATTGATGTTACGTCGATCAGTCCTACCCATTCTATGAAAATCAAATTTACTCTACAGATATTCGCACCGCATGCATAG
- Protein Sequence
- MPLGNKPECVKCGTRETPLWHSTDAGNLCNACLEDERNAEAHSSSKADDDDKSGLLKPRRSTRITKYCNTKTTGSYRVVPKGKGRRNLFKKTPIKAPTATATPVTSNYVFYKGTYFQVGDVVSVLDVDGGVFYAQIRGLLTDQYCEKSAALTWLIPTSASPPPDEGFAPETYMIGPEEDLPRKLECMEFVMHAPSDYFKLKNSPYPPPLTEKGADRDQTKSSSLALEGKDVLVVVVVLVVVVVVSAIFGMTEETSQLGANEVTAGQNLRSFIACGKSGSFISFICCGIFMFFTADTARAGAAVIPACTHHTGAPEGQADGVNKTVWICKSPKIDVTSISPTHSMKIKFTLQIFAPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -