Pcoc007562.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- CSRNP3
- Assembly
- GCA_014839585.1
- Location
- QVOB01010923.1:6044-11293[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.033 7.8e+02 0.2 8.2 42 122 50 128 18 157 0.53 2 5 0.28 6.6e+03 -2.8 0.5 95 109 213 227 186 273 0.51 3 5 0.24 5.7e+03 -2.6 1.6 83 153 284 362 244 369 0.53 4 5 9.9e-101 2.3e-96 322.3 9.0 1 218 674 886 674 886 0.91 5 5 0.68 1.6e+04 -4.1 0.6 65 86 1106 1128 1093 1152 0.43
Sequence Information
- Coding Sequence
- ATGGCACAGTTGCCCGAGATGGAATCGCCTTCGGCCTGTCAGGAGTATCTCGTTGAGGCCCAAGAGGATTCCACCTCAAATTCGGTGATGGTGCACGAGAGGATAAACGAAAGATCGGAGAACGGAGAACTCGAGGAAAGACAATCCAGTGATAATTTTTGTTTAGAAAAAGAAAAGAAAGAAGAAAATGAAAAGGAAGAAGAGAACAAAAAAGTGGAAGATCAGAAAGCGGAAGAAGACAAGGTCAATGAAGACAAAGAAGATTTGATGGAGAAGCTTCTTCAGGAACCTGAGGAGTCGATAAAGACAGTCGGTCCTCAAACTCATGATCTTGACGACGAGGAAACCAGGTTTGAGGAACCAGTCTGCATTTCCAGGAAGAGATCGGTCGAAAGCGATTTCCTAATTGACGAAGAAGTGAAGAAAGTGGGTCTTGAGATTTCGAAAGAGCAGGCGATGCAGCTGAAAAACGACATCAGGAGGCTGTCGCCGGTGCTTGTAAGCACGCGGGAGAGAACGCTGGGCGAAATATCTTTGATTTCGGAATCGTGTTCCTTCAAGAACGACATCGATGACAAAATAATGTCGAAGAGCGGTCACGACGAATTGTCGCAGGAGAACAAGATTCCGGTTACTAAGAACCGTGCGGAAAAAGATGTCGACGAAGCTAAACAGGAAGCGATTGCCAAGGTTACCGCGAGTTCTCCGGCAGAGTGCACAAGTTGCGACAATGTACTCGAGATCACCTCGGATCGCGAAGAGAGAAAGACAATTGAGTGCGACAGTCAAGAGAAGATATTCGATGTTGATTCTTCAGTGCTTTCCTCGGGGTGCGACGGTTTCAAATCGACGGAATCGAATAAACACGAAAACGTCAGTGATATCGGGAGCGCGCCTGACGTTTCGATTGAAAAGTGCGTCGACGAAACGACGAGTACTGTAGTCTCGAGTCCCGTCTGTCGGCGTTTGTCGGTGATGCTAAACCGCATCGACAACGTAGACGTGATAAAATCGAAAGATGATGCCGTTGAAAAAGACTCACTATATTCCGAAAGAAAAAGAAATTTTGAAGAGGAGTGCGGCGCGTCAGATAAGACTCCCTCGAAGAAACAGCGGTGGCATAACGACACTTCGCCGATGACCAGATCAAGAACAAGCGAGCTGATGGAACCTGTCCATAGTCCAAATAATCTGGTTTTGAAGAAGTGCAAAGTGGTGCTAGAACGAATCAGCGATGAGAAACAATCAGTAAAAACCGATGAAACCGATACTACTTCGCAGAAACTTGAGAGAGAAGGATCCGCGCCGGTGTCCGTAATCGGCCAGTTGGAGGAAGACGAAGAGGTGGTGCTGGCGGGTCCTTCGCTTTCTGGCGAACGCGACCAAGTGTTCAACGAACTGGACTCGTCGGAGACGATGCCAAGTTCGCCGGAGGAGATGTCGGAACCGGCAATGGACGTCGTCGAAGGTGTCGACACAGAAACGGAAACTGAGACTGGGTCTGACAGTTCGGAGGTGTCACCTATCGTGAACATTCGGGAATTGCGTGATGTCGACATAGCGTCCGATCAGTTGCCGTGTCCAGAAGCGGAACCGCTTTGCTGCGTGGAGGCGATGGCGCCGATTATGACAAGGCTGGAGACCGAGCGACCGGAAACTTACACCGAAGATTCCGCTGAGAGTTTGGCTCTGACAACTGGCGCCAGAGACGACGTTAGATCCGATGGGAGCGATTCCGGTCTAGGTAATGAAATTCCTGGTGATCCTGGTCCCACACCGGCCCCTGAAAGCGATTCCGAAACCTCTTTTCTCGATAGGCTGCCGGATGATATCCTCTCCGACAAAGAAAAAGGCATGAACCAACTGGAAAACTTTGCGACGTCGTCGGGCGCGACCGGGATACCGGAACAGCCGCCCATGACGAGCTTTCGGACACTGCCGGCTAAGAGCAACTTGAAGCGCAGATTGATCGACTGCATGGAGAATGATGAGTCGCGGAGCAACACCGAAGAACCTGTGAAGAAGAAGCGCAATATCCATTTCGACGCCGTAACTGTTTATTACTTTCCAAGAGCGCAGGGTTTTACCTGCGTACCTTCGCAGGGCGGCAGCACGCTCGGGATGAGCGCCACACACACGCACGCCGAGAGATTCTCATTATCGGAACACGCCGCCGAACAAAGGCGAATTCATCGCGCCCGTTTGGCGCAGCTGCGGTCCGAGCGCAACTGCGCGATCAACTGCGTGACTGAAACGGCATCTAGCTCGGAAGACCCGAGCGACGATACCGACGACGAGCCGAGCGATAACGAGGATCTTGACATCGATAGCTACTATTTTTTGCAGCCGGTGCCGACCTCGCAGCGTCGGGCGCTGCTTAGAGCGGCCGGTGTCAGGAGAATAGATGCCGTTGAGAAGGATGAATGTCGTGACATCCGGGCGAGCAGAGAACATTGCGGATGTGGTTGTAAGGGATATTGCGATCCTGAAAGCTGTCCCTGCAGTCGAGCCAATGTCAAATGTCAGGTGGATCGACCTGGGTTTCCTTGCGGCTGCACGCGAGACGGTTGCGCGAATAGCTCCGGCAGGATCGAATTCAATCCTATACGAGTGCGAACGCATTTTATTCACACTCTAATGCGATTAGAATTGGAAAAGAAACAACGCGAGGAAGAGGGTAGCGGCGATCACGATCAGACGAACAATCAGGGCCAAAGCAATAGAAATGGATCATTGAGGAATATCGGTTCTCTCGGCTCTGTGATGGACACTGCCGGTAACGGCGACGTGTGTACAATTCCAGGACCTAGAAGCGGAAATGGAGGCGGGGGTGGATTTACGACTCTGCACTACGAGACGAGTCATGACGGCGGCATAGTGACGGCCAGTTGCCAGCCGGAAGTGCCCGGCACGCGAGAGGACAGTTTGGATTTGTACGCAATCAGTGACGATTGTTATCCGAGCGAAGACGCCGTAGACGGCAGCCAATCGATCGTACAGCGAAAGCTGCATCCAGAGTTCAGCCAAGCCTTCCAGAGCTTCTCGCCGGGTGGCCCACAAAGCCCCGGTGGCAATGGCGGCGGTATGAGCTTCCAGCAATCTTCGTATCAGGATTACGGCTCGCCGTATGCGGGTCTCCCGTCCACGTCGCGGGTGCCGCAGTTTCAACAACCGCAGTTCCAATCCTCGGGGCCGCCCAATCCGGCCGCGTTTTCGCACTACGGACCATACGGCGCGGCCCAAAACACTGCGAGCGCCGGTCTTCAGAGTAACTGCGCCGCCCAGGTGCACCAGGTGCCACCCCCGAGTCAGCAGCAGCAGCAGCAGCAGCAACACTCGTCTTACGAGACGGCGGTGTTCGCGCAAGATGACGCCACGAGTACCGCGCAGTATACGAATTTAACCAATTCGGTGCAGCCAATGAACACGAGTGTCGTGCAGCAGATGCAGAACAAGCTCGAGCCTTTCTCGGAACTGCTCAGCGGCAGATATTCGTACTACGGCGAGATGCACGAGCCGCAACAACACCACGGTACTTACGGTGCTCACGGAACGACTTCGAAGATCGCGGAAATAATCGAACCCGGCCAAGTTGTCGGCGAGCAACAGTCCGAGAACACGTCCGAGGATTGCGACGAAAACTTCGGCGAAATTATTAAGAAATCCATGGTGGAAACCGTATCTGCCTAG
- Protein Sequence
- MAQLPEMESPSACQEYLVEAQEDSTSNSVMVHERINERSENGELEERQSSDNFCLEKEKKEENEKEEENKKVEDQKAEEDKVNEDKEDLMEKLLQEPEESIKTVGPQTHDLDDEETRFEEPVCISRKRSVESDFLIDEEVKKVGLEISKEQAMQLKNDIRRLSPVLVSTRERTLGEISLISESCSFKNDIDDKIMSKSGHDELSQENKIPVTKNRAEKDVDEAKQEAIAKVTASSPAECTSCDNVLEITSDREERKTIECDSQEKIFDVDSSVLSSGCDGFKSTESNKHENVSDIGSAPDVSIEKCVDETTSTVVSSPVCRRLSVMLNRIDNVDVIKSKDDAVEKDSLYSERKRNFEEECGASDKTPSKKQRWHNDTSPMTRSRTSELMEPVHSPNNLVLKKCKVVLERISDEKQSVKTDETDTTSQKLEREGSAPVSVIGQLEEDEEVVLAGPSLSGERDQVFNELDSSETMPSSPEEMSEPAMDVVEGVDTETETETGSDSSEVSPIVNIRELRDVDIASDQLPCPEAEPLCCVEAMAPIMTRLETERPETYTEDSAESLALTTGARDDVRSDGSDSGLGNEIPGDPGPTPAPESDSETSFLDRLPDDILSDKEKGMNQLENFATSSGATGIPEQPPMTSFRTLPAKSNLKRRLIDCMENDESRSNTEEPVKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERNCAINCVTETASSSEDPSDDTDDEPSDNEDLDIDSYYFLQPVPTSQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSSGRIEFNPIRVRTHFIHTLMRLELEKKQREEEGSGDHDQTNNQGQSNRNGSLRNIGSLGSVMDTAGNGDVCTIPGPRSGNGGGGGFTTLHYETSHDGGIVTASCQPEVPGTREDSLDLYAISDDCYPSEDAVDGSQSIVQRKLHPEFSQAFQSFSPGGPQSPGGNGGGMSFQQSSYQDYGSPYAGLPSTSRVPQFQQPQFQSSGPPNPAAFSHYGPYGAAQNTASAGLQSNCAAQVHQVPPPSQQQQQQQQHSSYETAVFAQDDATSTAQYTNLTNSVQPMNTSVVQQMQNKLEPFSELLSGRYSYYGEMHEPQQHHGTYGAHGTTSKIAEIIEPGQVVGEQQSENTSEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268264;
- 90% Identity
- iTF_01271206;
- 80% Identity
- -