Pcoc022405.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- Trerf1
- Assembly
- GCA_014839585.1
- Location
- QVOB01004550.1:9314-19605[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8 8.6e+03 -2.6 0.1 30 42 638 650 637 651 0.89 2 2 2.7e-10 3.9e-07 30.5 0.0 2 46 803 847 802 847 0.96
Sequence Information
- Coding Sequence
- ATGTTACAGGACGCGGAGAACAAGAAGACCGAGAAGAAAGAAGGCGTCGGTCCGCCTCTGCAGACAGCGTCCGTCAGCGTGAGAGCGTTGATCGAGGAGAAGATCATACAGAAGAGAACAACAGCAGCGGAAACGAATGTCACTCAACAGCCTCGTACAAACACCACCGTCTTCACCACCCAAACCGACGTTGTCTCGCAAGTCGCCGGCAAGACGAACTTCGCGGTACCGGCACCGCCACCTTTGGCGGCGGGAGATAAAGCGCGCCGGCTTTCCGACGGCGAACACTTCCGGCAGCCTAACGTCACCGTGGCCAGTCATACACCTATGCAAAAGCAACTGCAAGATGCACAACAAAGAGCTCAGGCTCAAGCGCAAGCGCTTGCCGACCTAATCTTGAAGGGTTCGAAGGTGGCTGTGAAGCGAACGACTTCCGATCCGGGACAAAGATTACAGCTGACACCTTATCAGCAGTCTGTGCAATCAACCACTAGCAATCAGCAGCAAACGAATAATCAGCAACCGCAGCAGTCGCAGCCTACGGTAACGGAAAACTTCACGATGACGGGTTACTCCGAAGACGGCGGCTATTTCAGTCCGACGCTGCAGGACGAGGTGTTTCAGCAGGTTACAACAGTTCCTGATAGCGTGCTTCTGCAGGCTACCCAGTTGGACTCGATTCAGTTCCAGACGACCAGCCTGTTACAAGAACAATCCAACGAACAGCTGCAGGATATCACGCTGGAGGACCGGTACTCGTCGCAACACACCGTCAATCCAGACCTTCAAGCGTTAGTGAACTCGCCATTGCCCGATTCTCTTGCTGAATTCGGTACTTATGCCGCGCAATATACAGAAAGTCCTCACACATTGCCTACCCAATCGCCTCTGCCGTCGCCTTTGACGCGACACGATAGTCCGAGCTTCACATATCCCACACCACCAGCCAGCCAGGAAGGCCTGCTTACCGGAAGCCTGCCACTGCTGAGTCCTCAAGAAGATCCGGAGAGCGTGAGGCAGGTGTCGTCGCCGCTCTCGGCGGCGTTCTACACCACCACGATGTCGTCCGCCGCGGCTGTGGAGGAGGCACTGAACGAGGTGCTGCCGGGGGAATCCGACGCGGACGCGGACCTCTACGGGTCCAGTTCGCCGAATCCGCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCAGCACCGTCGCCGCTGTCCTCGTTGCCGCCGTCCTCCGTCTCGTCGCCAGGACCAGTGTCTTTTACCGGCGCGAGCTTCCCCGTGTCGCCGCATCACACGCTCCAGAACCAGATGATGCCAAACTCGGAAGATCCGCTGCTGTCTTCGACACCGAAGGACTTCGCCGCCTCCGGTCGCAAGCGATTCGAGTTCCAGTCGTACAAACTGATCACGAGTCAGAACTTGATGGACTTCGGCCTCGGAAATGGCAGCTTGGCCGGCATTGTTGTCGACAACAACGGTGAGTTCAAGCTGATACAGACGGCGGGTCTGCAGAAGGCAAATGTGTTGGTGCAAACGAACTCGCTCAATCCAGCGTTAGCGATCAAGAAGGAGATTCGTTTGACGACTCCGAAAGTCGAACCCGTGACCGCGAATCTCGGTCTAAACGTTCAGGCAAATCAACAGCAGTGCAACACGGGACAATTCGGCCACCAACATGTCGTCTATCCGACTAAATTTCTAATTCAAACTAATCACGCGACAAAACACAATGACCTAAAGCACAAATCGGCCAATGGAAGTTTGCCAATACCTATCGATCAGATCAAGGAGGAAGTGTACGACATAGAAGACGTGCTTCTTGGCTCTGGCAGTTTATCCGCTAACAGCCCCGTGCGTCACTGTCGGAAAAGGCCGCGTATAGACAGCGGTCAGTACATCAACAGTTCGTATTCTTATCCCTCGCGGTTGCGGAAGGCTTGCGATCGCCACTGGGACAGCAGCTACACGCCACCGCCGATTCTGGATCCTTCTCGTCCCGGACCGGGTCTGTACGCCAGATTACATCAATATGACAGAGATTCGGACTTCAGTTCGGACGATTCTCAAGGAAATGACGGCCCACCGCCAAGAATCAATATTGGCACGAGATATCAGGCCACGATACCGCCGCTCAAGCAGGACAGGTATAGAGAAAAGAACGGTTCGGAAGCTGATCATCTTCTGTGGGATCCTGGCATAAACAACGCGCTCACGAACACCGAATTGGAGATGTACCTGCAGTTCGCGTGTTGTGCCGCGATGCCAGGCGGTGGTAGAAACAAGGAATATGCGCTTCATCTACTGCACATGTGCAAGGGAAATATTCATGAAGCGATGGTTAAGTTAATGCGACCAACCCCCACACTACCGGTGGAACATCCACTGCTCAGCTACGAGTGCCACGAGTCTGATAGATGGACGTCGCATGAAATGGACGCGTTTTATCAGGGACTGCTCAAGTACAACAAAGATTTTTCCGCGATTTCGCGAGACGTTGGTGCCAAGACAGCCAAACAGTGCGTGCAGTTCTATTATCTATGGAAGAGGCTCTGTCCTGACGAATACAAGACGGTGCGTATGTGTCACGGAAAACTAAAGATCAAGAGCGAAATCAAAAGCGAAATCAAAGATAGCAAAGACACCAAGGAACTTCGCGATGCTATCGCGTCAGTGACGGAAATGGACTTCAGCGAAGAGAAATCGATCTTTCACCGTACCCTACATACAAACGAAAGAGAAAATTCTGCAACTTTAACCACCAGCGACGGAGAACTGAGGTTATTCGCATACGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCAACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCCACCCTACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCACACATGAAATCTCACAGACCAATACCTTTGCCCGATTCAACGGCTCAGGAATCTAAGCGACCCGCGCAACAACTGTCGAAAGCGCAACAACTCCAACAACCACCACACCAAAGCCAGCAACAGCTGGACAATTCTACGCCACAACCTCAAGACCACCAACAGCAACTGCCCGCGAATATTAGTGACAACAGCGCCCACAACACAGCACATTTGTGTCACAATCCGACGAGGCCCCCATAG
- Protein Sequence
- MLQDAENKKTEKKEGVGPPLQTASVSVRALIEEKIIQKRTTAAETNVTQQPRTNTTVFTTQTDVVSQVAGKTNFAVPAPPPLAAGDKARRLSDGEHFRQPNVTVASHTPMQKQLQDAQQRAQAQAQALADLILKGSKVAVKRTTSDPGQRLQLTPYQQSVQSTTSNQQQTNNQQPQQSQPTVTENFTMTGYSEDGGYFSPTLQDEVFQQVTTVPDSVLLQATQLDSIQFQTTSLLQEQSNEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFGTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRQVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESDADADLYGSSSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGASFPVSPHHTLQNQMMPNSEDPLLSSTPKDFAASGRKRFEFQSYKLITSQNLMDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKANVLVQTNSLNPALAIKKEIRLTTPKVEPVTANLGLNVQANQQQCNTGQFGHQHVVYPTKFLIQTNHATKHNDLKHKSANGSLPIPIDQIKEEVYDIEDVLLGSGSLSANSPVRHCRKRPRIDSGQYINSSYSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYDRDSDFSSDDSQGNDGPPPRINIGTRYQATIPPLKQDRYREKNGSEADHLLWDPGINNALTNTELEMYLQFACCAAMPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPVEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKTVRMCHGKLKIKSEIKSEIKDSKDTKELRDAIASVTEMDFSEEKSIFHRTLHTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTLLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTAQESKRPAQQLSKAQQLQQPPHQSQQQLDNSTPQPQDHQQQLPANISDNSAHNTAHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422166;
- 90% Identity
- iTF_01268212;
- 80% Identity
- -