Basic Information

Insect: Pseudomyrmex concolor
Gene Symbol: SNAPC4
Assembly: GCA_014839585.1
Location: QVOB01004840.1:15359-18040[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.09 1.3e+02 3.2 0.0 3 17 168 182 166 184 0.90

2 6 0.0096 14 6.3 0.1 12 46 221 260 219 260 0.83

3 6 1.5e-07 0.00022 21.7 0.1 3 45 268 312 266 313 0.94

4 6 4.5e-06 0.0066 16.9 0.3 3 43 320 364 318 367 0.95

5 6 1.3e-11 1.9e-08 34.7 0.0 1 44 373 417 373 419 0.92

6 6 1.4e-12 2.1e-09 37.7 0.0 4 42 428 466 426 470 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.09	1.3e+02	3.2	0.0	3	17	168	182	166	184	0.90
2	6	0.0096	14	6.3	0.1	12	46	221	260	219	260	0.83
3	6	1.5e-07	0.00022	21.7	0.1	3	45	268	312	266	313	0.94
4	6	4.5e-06	0.0066	16.9	0.3	3	43	320	364	318	367	0.95
5	6	1.3e-11	1.9e-08	34.7	0.0	1	44	373	417	373	419	0.92
6	6	1.4e-12	2.1e-09	37.7	0.0	4	42	428	466	426	470	0.96

Sequence Information

Coding Sequence: ATGAGTGACTCAGAAGACTCTGATATTCTGGCTGACATCAAGGCATTGGATGAAGCTTTGAGTTTAAAAACACAGAATGCAACACAAAGTGATAATAAGAGTTTTTTGCGATCTAACAGTCTGTCTTCTATAAGATCAACTGATTCTGAGAGCAGTGATGACGAATGTTTTGACTACCTCAGTACAATTCAGTGTACTGATGTGAACACTCTGAACGCTTATGAGATTAATATAAAGCTGACTGTAGGTTTTAAATTGGTTCAAAAGAAGTTACTTAATCTGTTGGACAAGTGTGAAAAGAAGATAAAGCAATTAGATGACAAACTAAATAATGGCACAGGTAGCAATGTTGATTGCAGTTTAAACTCTAAACTAGCTATGACCAATGCTGGCATGCCATATTTCAAGGATAAGGATTTATTTTATTGCCCTAAAAACCATGACGCAAAGCTGAAAGAATCTCGAGGCGAATTGTCCGTTCTGTCTTTGAGCAAACCAAGTCGTTGGTCAGCCAAAGACAAAGAGACTCTTCTGAAAGCTATACAAAATGAAGCCAGTGAAGCAATATTAGCCAGCAGATTTGGTCAGGACACTGGAAAAAACAAGAAGAAAACATCGGATGATCAATGCAACGAATCAACACTTGTGTTTCCAAGAAATTTCAAACAGATGGTAGGATCACTGGGAGAGAGAGAGTTCGATTGGTACAAAATTTCTGTCATGCATTTCGAAAATAGACATTCGCCAGTTGAATGCCGAGCTATGTGGAATGTCTACTTGCATCCAGACATCAGAAAAAGTGGATGGACCAATCGAGAGAATAATTTATTGCTAATGTGTGCCAAGGTTAATAACTATCAAGATTGGGATACTATTGCTAAGAACTTGGACTCAAATCGTAGTGCTTATCAATGTTTTGTAAGATATAATACCATTAAGAAAGTTCCAACTGGAAGCTCATGGAGCAAGACGGAAGATAGACATCTCACACACATTATAGATACTCTTAAAACAGGTGATTACATTCCCTGGTCTGAAGTCGCGTTTTATCTTCGACACAGAACTAAACAACAGATTTACACGCGATGGACGTACAGAAAATCGCCACATTTGAAAAAGGGTAGATTTACTTATTCAGAAACCGATACTCTTTTGAAAGCAGTGAAAAACTATGGCACTGACTTTTCCAAAATTTCGAACAAAGTGATGCCTAATCGATGTTCTTCGCAACTTCTCGATCATTACAATAGGATAATGGAAAGATTGGTAGGCAATAACATATGGACGTTCGATGACGACGTGAAATTAATTCATTTGCGTCAAACGTTAGGTAACGCCTGGGTTAAAATAGCCGAGTATTTTCCTGGAAAATCAAGAACACAGGTGAGACATCGATACTCTGCACTATTAAGATATACAAGGAGAGATATCAGTCTTGCGAATATACCTAGAGCACGTGAAAAAACTAAGACTACAAGAAAAACGAGTAAGAATACACCCTCGTCCACGAAACAGAATGTTTTTAATACAAGTTTAGAGCTTGATTCTGTGAACATGAATGATATTCATCTAAGACTGTACGAAAATCTTTCTTTTCCGCCTTCGAAGGAACCTTTTGCTATACAAGAAGAATGCTATGATTTCGAACAACTTGTACGCGACACCAAAAGGTCATACGATGTGTTACACATGTTAGACGCTCGTCTTCATATACCGGGAGGTGATTTTTTGGATTACGTACATTTAAATAAAAGAGACAAACAACTTTTTCTTTCTCTGATAGAATACATAAATAACGCAGGCAATAATCACAAGCAGAAGATCGCATTGGTGGAACAATGCAGAACGCGAATGTTCGGTAGTGTTTCAAAAGTTAGTGAAGAATCTCATTTCATACCGCCACTCCCGTTTAACGGCCATATGCGGGTAGGCAAATCAAGAAAGTCAAACATCACAGATGTAATAGATTGCGATTTAAATTACGAGGAAAAGTATCTCATTGATGTGCCTGCATATTTTTTCGTATCCTCTCATACACTTCCTTTTGTCAGTTGTGAAGAAGAAATTCAATTTGACAGACTTAGTGAATATTTGATAGGTTTAACTTTTAACGAAACTTTTAACGATAAAACGACAAATCTGTTGAGATCGTTGCCATGTACTTTGCTTTTTAGTAAGAAAGAAAGAGAAACCGCAGAAGGAACGACAGATTTAGAGATTACAAACAATCACAAATACAAAAACTTACACCACTTGTATGATTCGCGCAATTTTGACCACCTTGACGAAGTCGAAGAAGCAAATATGTTCAGCGATTTAATTCCGCCAAACCAGGCGACTTTGATAGGTTTCAAAAACTTGCTTCTTTGGAAACTGTTATATGAATATCAAAATCACGACCTCCCGTCGCTAGAAAATGAAGAATTGGAAACAGAGAGTGCTGACTATCAACTTCTGCGAATGCGGCTGGTACGATTGTTTAAAATACCAATAGGTTTGTCAAACATTAAATTGCGAATTACCGACTTGGATCTAAACGTATTTCTTGAAGAAAAATACATTTGGATCCAAGAAGATCCAAGTGTTACAAAGAAAAGAAAATCTCTAGAAAGTGAGAATCTTTCTATATATTTGAATAAAAAACGTAAGTGTAATAGAGTTTCCAATGATAAAGTAGCTTAA
Protein Sequence: MSDSEDSDILADIKALDEALSLKTQNATQSDNKSFLRSNSLSSIRSTDSESSDDECFDYLSTIQCTDVNTLNAYEINIKLTVGFKLVQKKLLNLLDKCEKKIKQLDDKLNNGTGSNVDCSLNSKLAMTNAGMPYFKDKDLFYCPKNHDAKLKESRGELSVLSLSKPSRWSAKDKETLLKAIQNEASEAILASRFGQDTGKNKKKTSDDQCNESTLVFPRNFKQMVGSLGEREFDWYKISVMHFENRHSPVECRAMWNVYLHPDIRKSGWTNRENNLLLMCAKVNNYQDWDTIAKNLDSNRSAYQCFVRYNTIKKVPTGSSWSKTEDRHLTHIIDTLKTGDYIPWSEVAFYLRHRTKQQIYTRWTYRKSPHLKKGRFTYSETDTLLKAVKNYGTDFSKISNKVMPNRCSSQLLDHYNRIMERLVGNNIWTFDDDVKLIHLRQTLGNAWVKIAEYFPGKSRTQVRHRYSALLRYTRRDISLANIPRAREKTKTTRKTSKNTPSSTKQNVFNTSLELDSVNMNDIHLRLYENLSFPPSKEPFAIQEECYDFEQLVRDTKRSYDVLHMLDARLHIPGGDFLDYVHLNKRDKQLFLSLIEYINNAGNNHKQKIALVEQCRTRMFGSVSKVSEESHFIPPLPFNGHMRVGKSRKSNITDVIDCDLNYEEKYLIDVPAYFFVSSHTLPFVSCEEEIQFDRLSEYLIGLTFNETFNDKTTNLLRSLPCTLLFSKKERETAEGTTDLEITNNHKYKNLHHLYDSRNFDHLDEVEEANMFSDLIPPNQATLIGFKNLLLWKLLYEYQNHDLPSLENEELETESADYQLLRMRLVRLFKIPIGLSNIKLRITDLDLNVFLEEKYIWIQEDPSVTKKRKSLESENLSIYLNKKRKCNRVSNDKVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267492;
90% Identity: iTF_01269727;
80% Identity: -