Pcoc021590.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- ct
- Assembly
- GCA_014839585.1
- Location
- QVOB01024623.1:51051-65885[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-28 6.1e-24 84.2 0.0 2 72 345 416 344 421 0.95 2 3 1.2e-32 1.4e-28 99.1 0.0 3 77 756 831 754 833 0.96 3 3 5e-31 5.9e-27 93.9 0.0 3 75 986 1059 984 1063 0.95
Sequence Information
- Coding Sequence
- ATGCCCGAAGTAAATCGGAGGAGGGAAAAGCTCATCAACCAGTTGGTTGAAGAGGTGTCTAGGCTACAGCAGAACCTTCAACGCCTTCAGGAACAAAGTGCGCAAGCAACGGTGCGGCTCGAGGAGGAACTCGAAGTGCGGAGGCAGCACATCAACAGACTGGAAAGTAAATTGGAGCGGCAGAGAGATTACGACGACCTAAAGCGCGAAATCAGTGTACTGAGATCGGTCGACCTCTCGCAGATACCAACCGGTGAGCCCGGAAAGAGTTTGGAACATCTTCTTATGGAACGCTTCAAGGCGCTCCAGCAAGCCGAGAACCTGAAATCCTCTAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCGTCACCCCACGGGGTTGGAGGTGTACCACCTACGTCCCATGTGTCCTCCCAACAACCACCGCCACCGCCTCCGACGGCAACCTCCCTCCCTCCGCGTTCCACTCCAACGCCTTCTTCGGCCTCTTCGACAACTTCAAACCTTCTCTTCCCGCCACCTCTTCAAAACGTCGAGACCTTTGGCTCATTCCTTGACGCCATTGAGAAAGCTCCAACACCGGTATCGGGACATGAGACGCCAGCACCTCCAACACCATCCTCCACAACCGCCTTAACATCACCGCCGAGCTTCCAACCACCTACGTCGATAGTGGAAACCAATACTCCTTCGGCTTCCATCAACGGCGGCGGTCTCACACCCGGTGTTCCGAGCGCACCTCCTCCGAAAAGCCCGGCTGATCAGGAATCATGTCACAACAATAACAACAGCCACCATTTAGCGAACAATAACATCGGTGGTCTGAGCGTTCTCGACACGTTAAAAAGTCCATTTCGGTTTGACGATCGAACATATCCGTTCCGATTCGGTGACGAGTTCGGAGCCGCCGGTATGGCCGGTCGGCTGGGCGAATCTCTCATCCCGAAAGGTGATCCCATGGAGGCGAGACTGCAAGAGATGTTACGTCACAATATGGACAAGTACGCCTCGCAAAATCTCGATACTCTTCACATAGCTAGACGAGTGCGGGAGTTGCTATCGATACATAATATCGGACAGAGATTATTCGCCAAATATGTTCTCGGGCTGAGTCAGGGCACGGTCAGCGAGTTGCTTAGTAAACCCAAACCTTGGGACAAACTGACCGAAAAAGGCCGTGACAGCTATCGGAAGATGCACGGTTGGGCTTGCGACGATAACGCTGTAATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTCGCACGTGGGCCACAGGATGGTGGTCCACCAGAAATGAATGACGAAAGGTTGGCACATATTCTCTCGGAGTCGGGCCATATACAAATGAGGAGTGAGCACGAGGTGTCGAACGACGCAGACAGCAAGAGTCCGAACAGAATCGGTTGTCCGAGTCCATTCAATAAAGATAGACTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAGAACGATGACATTCCTCAAGAGAAGGTGGTGAGAATTTATCAGGAAGAACTAGCAAAACTGATGGGCAGAAGAGTAGAGGACCTTCGTCCACGAGAGTTTTCTAGTGCGATCTTTCCGCATTTTTTCAGTGGTACTCAAAGTGGTCTTCAAGGTATCGAGCGTACCCAAGAAGACATTCGACTGGCCTTGGACGCTTACCACCGTGAGCTTCAAAAGCTGAACGCAGCACCAGGTCAGACACCCTCGATGACTGGATTGCCAGGATTGCCCGGATTGCCAGGTTTGCTGGCGCTTCAGCAACAAGCTCTTCAGCAACATCATTTGGCCGCGAATGGCGGCGGAGGCGGCAGTGTTCAGGATTTGAGTTTAGGCAAAGTGGATCCGCGCAACAAAATGATAAACGGCGTGTCGGAAGAGGAGAAAGAGAAAATGGAAGAAGCGATGAGGCACGCAGGAAGTGCTTTCTCTCTGGTGAGACCAAAGCAGGAATCGACAGGTCCGCAATCGACGCCCGGCGGTTCCAGCGCGAGTTCACCGCTTGGCAATTCTATACTCCCTCCTGCAATGACACCTAGCGAAGAATTCTCTAGCGCGGCGGCAGCCAGTCCTCTTCAAAGGATGGCATCCATCACAAACAGTTTGATAAGCCAACCGTCCACGCCAACTCACCACTCGGCTAATCAAAGACCGTTGAAAGCTGTGCTTCCTCCAATTACGCAGCAACAGTTCGATTTGTATAATAATCTTAACACCGAAGATATTGTCAAAAGGGTGAAAGAACAACTGTCTCAGTATTCGATTTCACAGCGACTATTCGGCGAGTCAGTATTGGGTTTGTCTCAGGGATCGGTATCGGACCTTCTAGCGCGTCCTAAACCATGGCACATGCTTACTCAAAAAGGTCGCGAACCCTTCATTCGAATGAAGATGTTCCTCGAAGATGACAACGCAGTACACAAGCTGGTTGCCAGTCAATACAAAATCGCTCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACGCCTATGAAACCTATGCCGCCGACAAAACTCGTCCAAGAGCAACTGCAGAATGCGGCGAAAGCGCAGGCTGCTGCTCAAGCGGCCGCGCAAGCGGCGGCACAACAGCATCAGCAGGAGAATCAGATGCAACTTGGCCCGCCTCAGCAAAGTCCTCAGCATCCACAGCATCCGCAACCGCCACCACCAATGATGTTGACCCCGCCCGGACCTCATCATCCTCATACTCAGCTCAGCATGGAACTTCAGAAGAAGCAACAACAACAGCAGCAACAAATGTCACTGCATTCGCCGCATCATCAGATGGCGCCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCGAGCGTGTACGAGATGGCTGCTCTCACACAAGATCTCGACACACAAACGATCACCACGAAAATCAAAGAAGCGTTACTGGCCAATAATATCGGCCAGAAAATCTTCGGTGAAGCGGTTCTTGGTCTTTCGCAGGGTTCTGTCAGTGAGCTTCTGAGCAAACCGAAGCCGTGGCATATGCTTAGCATAAAAGGCCGTGAACCTTTTATCAGGATGCAGCTTTGGCTGTCAGACGCGCACAACGTCGATAGACTGCAAGCATTGAAAAACGAGCGACGAGAGGCGAACAAAAGACGACGCAGCAGTGGCCCGGGTCATGACAACAGTTCTGACACTTCGAGTAATGACACCGCTGAGTTTTATCACGCAGCGTCACCCGGTCCGGGACCCACCACCGGTAAGAAGCAACGTGTTCTCTTCTCTGAAGAACAGAAAGAAGCTCTTAGACTCGCTTTTGCATTGGATCCGTATCCTAATGTAGCTACCATCGAATTCCTCGCTGGTGAACTCGCCCTATCCTCGAGAACAATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAGCAAACGCCACACGGTCAGCCGGAACCACAATCGCCACGAGAACCTGGCCAGCCTTTCGATCCTGTTCAATTCAGATTACTACTGAACCAAAGACTGTTAGAGATTCAAAAAGAGAGATTGGGATTAGGAAATGTACCTTTACCTTACTCTCCATATTTTAATCCCAATCTGGCGGCTCTAGTAGGTAATGCATTGAAAGAGCAATGCTCCGGCCTCGATCTCTCAATGAACGCTCTGAAGAGAGAACCAAATCAGGAGTTCGAAGACGAAGATGTCGAGGACGCGATGAGTAATCTAGGTAGTGAAGATTCGGAAGGTTCGGCCGGCAGTATAAAGAGAGAACCCGCGGAAACGCCGACGGCACCCGCGACGGTTAGGTCTAACAGAAGAAAACCTGCAGCACCGCAATGGGTGAATCCAGAATGGCAAGAACCAACAAGAACAGGCGACGAAGTCATTATCAATGGTGTTTGCGTGATGCAGACGGATGATTACGGTGTGAAGAGGGAAGCCGAAGAGACTATAAGAGTCGAACCGACACCCGTGCAGGACCGGTACGAAGAGGACGCTCAGAGCGACGTCTCTTCCGTGTCTGCCAACAATGGGGCCGATCGGGACAGTCCGCTTCCCAGTCCAAAGTCTGGTCAAAATAGCCCAGTGACGTCACTCAGACCGCCGTCGGCACAACAAACGCAACAATCCACGGAGGAGAGTCCGAAGGACGTGGTAAAGCAAGAACCGGAAGAAACGTGGGATTATTAG
- Protein Sequence
- MPEVNRRREKLINQLVEEVSRLQQNLQRLQEQSAQATVRLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKSSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTATSLPPRSTPTPSSASSTTSNLLFPPPLQNVETFGSFLDAIEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSIVETNTPSASINGGGLTPGVPSAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMNDERLAHILSESGHIQMRSEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFSSAIFPHFFSGTQSGLQGIERTQEDIRLALDAYHRELQKLNAAPGQTPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGGSVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPSEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSANNGADRDSPLPSPKSGQNSPVTSLRPPSAQQTQQSTEESPKDVVKQEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729955;
- 90% Identity
- iTF_01266775;
- 80% Identity
- iTF_01266775;