Pcoc003493.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- Kdm5
- Assembly
- GCA_014839585.1
- Location
- QVOB01007810.1:17555-30863[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-25 4.9e-22 78.5 0.0 2 89 84 167 83 167 0.94
Sequence Information
- Coding Sequence
- ATGGAACGCGCGGAGAACGATTTTGACTTCACGGTGCCGCCAGAAGCACCGGTGTTCGAGCCCACTAACGAGGAGTTTCTCGATCCTCTAGCTTACATCGCGAAGATACGCCCGATCGCCGAGCAGTCCGGCATCTGCAAGATCAAACCACCGCCTAACTGGCAGCCGCCTTTCGCTGTGGACGTGGACAAATTCAAATTCGTTCCCCGAATACAACGGCTAAATGAATTAGAAGCTAAAACGAGGATTAAGCTTAATTTTTTAGACCAAATTGCGAAATTTTGGGAACTCCAAGGTTCATCCTTGAAGATTCCCCTTGTGGAACGGAAGGCTCTGGATTTGTATTCGTTGCATAAAATAGTTACCGAAGAAGGCGGTATAGATACGGTAACAAAGGAAAGAAGATGGGCAAAAATCGCCAACAAATTGGGTTATCCGTCCGGACGAAGCGTAGGCAGCATATTGAAAGGACACTACGAGAGAATTTTATATCCTTTTGACGTCTTCAGACAAGGAAAAGCATTGTCAGATATTAAAATTGAACCAGAATCCGAAGAAAAAAATGAGAAAAAAGATCGCGATTACAAACCTCATGGTATAATATCACGACAACAGATCAAACCTCCAAACGAGAAATTCTCACGACGATCCAAGAGATTTTCCGGACAAGACGAGAAGCAGGATGTGTCGATTAAAGATGAGTGCAAGGAGGAGTGTGATTCGGACAATGAGTGCAAGGAGAAGATGAAAATTAAGCATTTTAATGACACGGATAAGAGTAAGGAGCTCAAGAAGTTACAGTTTTACGGACCAGGTCCCAAAATGGCCGGATTTAATACCAAAGAGGCAAAGAAATCCAACAAAACGCGTGGTTTAAAGCTTGTTTATGAATTCGATCCATTGGCGAAATATATTTGTCACAACTGTGGGAGAGGCGACAATGAGGAGAACATGTTACTCTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTATGCCACCACTGACAGAAATACCGAAAGGCGACTGGCGGTGTCCTAAGTGCGTCGCTGAAGAGGTCTCAAAGCCAATGGAGGCGTTCGGCTTCGAACAAGCACAAAGAGAGTATACATTACAGCAATTCGGAGAAATGGCTGACCAATTCAAAAGCGATTATTTCAATATGCCAGTACATATGGTCCCGACGTCTTTGGTGGAAAAAGAATTTTGGCGAATAGTATCGTCTATCGACGAAGACGTGACTGTCGAGTATGGCGCCGATTTGCATACAATGGATCACGGTTCAGGATTTCCGACAAAAACAAGCGTTAATTTATTTACCTGCGATCAAGAATACGCCGAATCGTCGTGGAATCTGAATAATTTGCCGATATTGCGCGGCAGCGTTCTGGGTCACATTAACGCCGATATCAGCGGCATGAAAGTTCCCTGGATGTACGTCGGTATGTGCTTTGCAACGTTCTGCTGGCACAACGAAGACCACTGGAGCTATTCCATTAATTATCTGCACTGGGGCGAGCCGAAGACGTGGTACGGAGTCCCGGGTTCTCAGGCGGAACGTTTCGAACATTCCATGAAATCCGCCGCGCCAGAACTATTTCACAGTCAGCCTGATCTGTTGCATCAACTTGTTACTATTATGAATCCTAATATATTAACAAATGAAGGCGTACCAGTGTTCAGAACTGATCAGCACGCAGGCGAGTTTGTTGTAACATTTCCGAGAGCGTATCACGCAGGTTTCAATCAGGGTTATAATTTTGCTGAAGCTGTCAATTTCGCACCTGCGGATTGGCGCTGCGAGAAAATACCCTACTCACTGTCGTTCCCCGGGGAGAGCAGTTGGGGTGAAAAGGGGGCACCCTCGCAGGAAAAGAAGGGCGGGGCCCCGTACAAAAGGGCCCCGGGATCTAAAACCAACCCCTGGGTGGAAGCCTTCATCAAGGAGAGAATGTCTCGAAGTTTCCTGGTGGATTCTTTAATCGGCAACAACTCGCCGCCCTCGTACCCGCTGCCGTACTACGGTAGCCAGCTGCCTAATTACATGTTCAATTTTTTCAATCTCGGATTGAGCTATCAGCCAATCAGACCGGTGCCCAGACCGCCAGCTATGCCGGTGCCGATCAGCCCGCCGGCTCTAGGAGTGTTGTCGATACCCGGACAAAATCCTCCATCGCCTTTAAATACTTCGACCAGTAGACTATCAGACGTTTCAGCACCCAACGAGTCCCCGTCCCGCAATAGCACTCCGACTCCTCCACCGAAGTCTCCGGGCTCCGTCAGTAACAGCTCGAAGCGTATTCGGACCGCGTTCACCAGCACTCAGCTTCTGGAATTGGAACGCGAGTTCGCCTCGAACATGTATCTGTCGCGGTTGCGTCGGATCGAGATTGCGACCAATCTGCGACTGTCGGAGAAGCAGGTGAAGATCTGGTTTCAGAATCGTCGCGTAAAATACAAGAAGGAGGACCTGCCGTCCGGTCAGAGCCAGAAATGTTGCTGCCTAAGGACCTGCGGCAAACGGAAGGACAGCTGCGGCGAGGACTCGCCCGGCCGAAAGTGCGAACAGGAGCAGGAAGACATGAAGAGGTCTCCAAAGAATGAGAGCAACGACGAGCGCGTCGAGGCCGAGCACTTCGAGCGATCGATCGCGAATAAAGATGCTCTTCGCTTCGAAGAGAAGTCTTCGGACTTCACGAGAAGAAACTCCGCGCAAGACAGAGCAATCGGATACGAAGCGCGAGATTTCTCTCGAGGTTGCAAGCGTAGTTTGTCGGAAGCGAGCGAGGAAGATGTCAAGAGGAGGAAGATGGAGGTAGCGACAGATTATCAGACTACGAATTCGGAGACGATTACAACTCCGATCTTCAGAAGTATAGGATGCACGAAATACACCGTTGAGAGAATCGTTAACTCGTAA
- Protein Sequence
- MERAENDFDFTVPPEAPVFEPTNEEFLDPLAYIAKIRPIAEQSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTEEGGIDTVTKERRWAKIANKLGYPSGRSVGSILKGHYERILYPFDVFRQGKALSDIKIEPESEEKNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQDEKQDVSIKDECKEECDSDNECKEKMKIKHFNDTDKSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGLKLVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWRCEKIPYSLSFPGESSWGEKGAPSQEKKGGAPYKRAPGSKTNPWVEAFIKERMSRSFLVDSLIGNNSPPSYPLPYYGSQLPNYMFNFFNLGLSYQPIRPVPRPPAMPVPISPPALGVLSIPGQNPPSPLNTSTSRLSDVSAPNESPSRNSTPTPPPKSPGSVSNSSKRIRTAFTSTQLLELEREFASNMYLSRLRRIEIATNLRLSEKQVKIWFQNRRVKYKKEDLPSGQSQKCCCLRTCGKRKDSCGEDSPGRKCEQEQEDMKRSPKNESNDERVEAEHFERSIANKDALRFEEKSSDFTRRNSAQDRAIGYEARDFSRGCKRSLSEASEEDVKRRKMEVATDYQTTNSETITTPIFRSIGCTKYTVERIVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01266754;
- 90% Identity
- iTF_01266754;
- 80% Identity
- iTF_01266754;