Pcoc003647.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- cnc
- Assembly
- GCA_014839585.1
- Location
- QVOB01018693.1:15202-17174[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5 7.3e+03 -2.5 0.7 19 29 233 243 233 254 0.82 2 2 6.1e-16 6.9e-13 48.8 8.4 3 65 262 324 260 324 0.96
Sequence Information
- Coding Sequence
- ATGTACACCATGCGAATGTTGGACAACGGTAGCAACAATGCGTCCGGACCGACCGGCGCGGCGGCTCTACCTGGTGTGCAAACAGCTGGTGGCACAACTTCGACGGCCACGGGCGTCACGACTTTACCTGGTGTAACCGACGAAAGAATGGATGCTTCGAGCGATAGCGCCGTGAGTAGCATGGGAAGCGAGCGCGTACCGTCTCTGTCGGACGGCGAGTGGATGGAAACTGGATCCAATTCCAGTCATACTCAAGCGGACTCCCATTACACCATGGATTACGCGAGCAAGTATCGCATGCCATACGACTGCAACTATTCTGTATCCGGGAGAAACGCCGGCTCTCCGAGATGCCAGACGGAACGAACGGTTCCGCCGGTTGCTCAGAAGAAACATCAGATGTTCGCCAAGCGATATTTCCAGGAACAAGGCACTTGCTCACCTTTAGGAGCTACCACACACCCGACCACTCCGATGAAGTACGAATATGACACGCACACAGTCGGCGCGGGTGCACCCGCGAACACGTATTCTGGACCAATTGAGGGTGCAACCGGGCCGCAGTCAGAAATGAAATATAGTTATAGCGTGGATTTCAGCCGTCATCAGTCCGGGCGATCTGCAATAGAACATGTCCATCACAATCACACCTATCATTTACCTGCCGAGAGCTCAGGTTCTCTTCAACGTCCTATTTCTCGTGACAAGAAAGTTCGCAAAACTGACGAAGAGCATCTAACGAGAGATGAGAAGAGAGCAAGAGCCGAAGCCCAACTATCTTTAATACGCGACATTAGAAGACGAGGCAAAAACAAGGTCGCCGCGCAGAATTGTCGTAAACGCAAATTAGATCAAATCATAAGTCTGGCTGACGAAGTGAAAGAGATGCGAGATCGTAAGAACAGGCTTCTCCGCGAGCGCCAATACATGCTTATTGAGAAGCAGCGAGTGAGAGACAAATTTAGTCAGCTTTACCGTCATGTTTTTCAGTCCTTACGAGATCCAGATGGTAATCAATACCATCCGTACGAATACAGTCTTCAACAGTCTGCGGACGGAAACATTCTGCTAGTTCCCAGAAATCAGACGAATCCGCACCAGTCACATCAATCTTCGATAGAGCCGAAGACGAAACCTGATCCTGAGCGCAAGGAATGA
- Protein Sequence
- MYTMRMLDNGSNNASGPTGAAALPGVQTAGGTTSTATGVTTLPGVTDERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYTMDYASKYRMPYDCNYSVSGRNAGSPRCQTERTVPPVAQKKHQMFAKRYFQEQGTCSPLGATTHPTTPMKYEYDTHTVGAGAPANTYSGPIEGATGPQSEMKYSYSVDFSRHQSGRSAIEHVHHNHTYHLPAESSGSLQRPISRDKKVRKTDEEHLTRDEKRARAEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKNRLLRERQYMLIEKQRVRDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNILLVPRNQTNPHQSHQSSIEPKTKPDPERKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765287;
- 90% Identity
- iTF_00182393;
- 80% Identity
- -