Pcoc020586.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- ATFC_1
- Assembly
- GCA_014839585.1
- Location
- QVOB01020387.1:634-7484[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1 6.9e+03 -2.5 0.0 37 46 242 251 240 255 0.49 2 2 5.6e-16 6.3e-13 48.9 11.1 2 63 270 331 269 333 0.95
Sequence Information
- Coding Sequence
- ATGTCCAATTTGGATCAGGAGATGTGGGATTGGAAGTACGAGCCGGTGTCCCCTGTCGAGACACCGCCGCTTGAAATTGATGACGACTGGTTTTTACTTGATAAGTCTGTAGAGAGTCCGAAAAATGCTGCGGAACCTGTTATGTACGATGACAATCCTTCCCGTGCACAAGTGGCCAAGAAGCTTTTGGATCAGCTGGACGAATGGATCAAAGAAGAACCTTTCTCGGATTGGCTGGAAGAAAAAATAGACCTGCCCATATTTGAACAACTTCCAGTTTCGGAGATCAGCCAAACTCTCTTGCAAGAATTCGAAACTGTTTTGGGAGATGTCGAAGCTTGCCATCAGATCGTTCCACCGATCAGCTCGTCGACGCTCACTCCTCCTCAATCACCGCCGCATAAAGCAATTAATGTTAATATGCAACTGTTCACACTACAGCCTGTGCAGCCGGTATTTACCAACACTCAAACTCAACCGTTGTATAACATGATCGTCCCGACGACGGAAGAGTCGTTGTATGCGAATGACGCGCCGCGTGAATGGAACACAGAAAACATATCGCTGAGTCCGTTCGGTGGGGATGTCGCGAACGATTTGGCAGTGGTGGATGAATATGTTCGCACGCATGCTAAAGACTTGCCGTCACCGTCGAGCCCATGTGTTAGCTCCGGCAGCAGTTGCATCTCAACCGAGGATTCCACCGACGACCCTGATTGGAGTCTCGAGTCTGAGAGAAAAAGTTTGAAACAATCGGCTTACGATTCTTCAAAGCATCGCCATAAACCGTATTCCCGGTCATCTCTCGAGGACAAGAAAGTGCGTAAGAAGGAACAAAATAAAAACGCGGCCACGCGTTATAGACAAAAGAAGAAGCAAGAGATCAAAGAGATCCAGGGAGAAGAACGTGAGCTCGCGGATCATAATGAGAAACTAAAAACTCAAGTAAAAGATCTGCAGCGTGAGATAGGATATCTGAAAGGGTTGATGAGGGATCTGTTTAAGGCCAAGGGTCTTCTCAAGTAA
- Protein Sequence
- MSNLDQEMWDWKYEPVSPVETPPLEIDDDWFLLDKSVESPKNAAEPVMYDDNPSRAQVAKKLLDQLDEWIKEEPFSDWLEEKIDLPIFEQLPVSEISQTLLQEFETVLGDVEACHQIVPPISSSTLTPPQSPPHKAINVNMQLFTLQPVQPVFTNTQTQPLYNMIVPTTEESLYANDAPREWNTENISLSPFGGDVANDLAVVDEYVRTHAKDLPSPSSPCVSSGSSCISTEDSTDDPDWSLESERKSLKQSAYDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIKEIQGEERELADHNEKLKTQVKDLQREIGYLKGLMRDLFKAKGLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268753;
- 90% Identity
- -
- 80% Identity
- -