Phyg016810.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- bab1
- Assembly
- GCA_029228625.1
- Location
- CM055404.1:4353814-4355309[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-17 1.7e-13 51.7 0.0 1 43 54 97 54 99 0.95
Sequence Information
- Coding Sequence
- atggaaaattCGCATGCCTGGCTGGGCGCATCAACATCTGCTTCCATTGCTGACAGCTACCAGTATCAATTACAGTCAATGTGGCAAAAATGCTGGAACACAAACCAAAATCTTATTCATCATCTGCGATTTCGTGAACGTGGTCCTTTGAAATCCTGGCGACCTGAAACTATGGCCGAGGCAATATTTAGTGTTCTCAAAGACGGCTTATCGCTATCACAAGCGGCTAGAAAGTATGACATTCCGTATCCGACATTCGTTTTATATGCGAATCGTGTACATAATATGCTGGGACCATCAATAGATGGCGGAACTGATTTGCGACCAAAAGGCCGTGGCAGACCCCAAAGAATTTTGTTAGGAATATGGCCGGATGAACACATCAAAGGAGTGATAAAGACTGTTGTTTTCCGTGATGCTAAGGACTTTAAGGAAGATGGAATGCATTTGAATTATGGACGCCACTCGcCGGTGTATccatttccagaattttccggtTCTCAATGTACAAATGGTCCCAACTCGCAGACTCCAGTTTCAGGCACCGAATCGCTTTCTCCAGAAGCGGCCGCGGCTGTTGCCGCCGTTGTAGGATTAAGACAACAAATGCAAATGGCAGCAGCTGCACATCATACCGAAAATTTTAATCTTCCAGCTCATTGTGCTAACATCCACTCAAACAATGGAGGTTCAGCTGGCTCGATACCGATGCCGAAATTAGGCTCACCAGCTGCTTCAGGTCAAATGGGCGGTAACAATGGCGGCAACAGTGTACAAATGCCTAGATTAGCATCACCAGCAATACCTGGATTGCCGAACAATATCCCACATAGTTTAGCTGGCATACCTGGCCTACATATAATGCAGAGCATGATGTCTGGGCAATCTAGTCAAAGTGGTATTACCATATCACCAGCGCATCACGGTAGTTCAAACACAAATTCGTTACATTCGTCTTCAGCTAATCAAAGTCACTCAAATTCACACGGACATCACCTCCCGTCAACAACAACCCTGAACAGTGGCAGTTTAAATATTTCGCGTGTATCGCCTCCATCTAGCTCGGCTCATGATTTACGCATGACTGGTTCAGACGATGAGAATCCCATCAATTCACCATTGGACATTGAATTAGAGTCTGGCGTAAATTTGGCTGTTAGTGGCATGGCATACAAATCGTCCAGAAGTTATTCGTCACCTAGACCAGAACACATTTTTGCCGACGAATTAAATGATTTCGTTAATACGCCACGGTCGTGTCCATCACGATTGAGTGGATTCAAGGAACCTGCTACTGGCATCAAATTAGAACCGATGACGGAATGTAGGGGTGAGTGA
- Protein Sequence
- MENSHAWLGASTSASIADSYQYQLQSMWQKCWNTNQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDFKEDGMHLNYGRHSPVYPFPEFSGSQCTNGPNSQTPVSGTESLSPEAAAAVAAVVGLRQQMQMAAAAHHTENFNLPAHCANIHSNNGGSAGSIPMPKLGSPAASGQMGGNNGGNSVQMPRLASPAIPGLPNNIPHSLAGIPGLHIMQSMMSGQSSQSGITISPAHHGSSNTNSLHSSSANQSHSNSHGHHLPSTTTLNSGSLNISRVSPPSSSAHDLRMTGSDDENPINSPLDIELESGVNLAVSGMAYKSSRSYSSPRPEHIFADELNDFVNTPRSCPSRLSGFKEPATGIKLEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -